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BaseInfo

ncRNA ID novel_zma_miR3578
Species Zea mays
Class miRNA
Genome position Chr8:157211765-157211818 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR2287162
Length 24
Mature sequence(if miRNA) 1 - ACGUGGACGCAUAUGGAAGCAGAU - 24
Stem-loop(if miRNA) --A  UG    CA   G        UU
   CG  GACG  UAU GAAGCAGA  U
   ||  ||||  ||| ||||||||  C
   GC  CUGU  AUA UUUCGUCU  C
GUA  GU    -A   A        UU
Stem-loop sequence ACGUGGACGCAUAUGGAAGCAGAUUUCCUUUCUGCUUUAAUAAUGUCUGCGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008672826.2
ncRNA:24   UA--GACGAAGGUAUACGCAGGUGCA   1
  ||--|||||||||*||||||||||||
targets:626   AUUCCUGCUUCCACAUGCGUCCACGU   651

1.5 PREDICTED: Zea mays dirigent protein 1 (LOC103648339), mRNA NA coding protein psRNATarget