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BaseInfo

ncRNA ID novel_zma_miR3575
Species Zea mays
Class miRNA
Genome position Chr7:97657129-97657317 [+]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 1 - UACGGUUGGUUGCUAAAACGGCUU - 24
Stem-loop(if miRNA) --                 A   -CUUU     U                   --A  --CU        CCAUAA         CUGUAAGUGCC        A
  UACGGUUGGUUGCUAAA CGG     CAGCG UCUACGGUUGGUCGCUAAA   AC    UUAGCGAC      GGAUGGUCG           GUCGCUAA G
  ||||||||||||||||| |||     ||||| |||||||||||||||||||   ||    ||||||||      |||||||||           |||||||| G
  AUGCCAACCAACGAUUU GCU     GUUGU AGGUGCCAACCAGCGAUUU   UG    AAUCGUUG      CCUGCCAGC           CAGCGAUU C
GA                 A   AUCAU     U                   AUA  UUAU        ------         -----------        U
Stem-loop sequence UACGGUUGGUUGCUAAAACGGCUUUCAGCGUUCUACGGUUGGUCGCUAAAAACCUUUAGCGACCCAUAAGGAUGGUCGCUGUAAGUGCCGUCGCUAAAGGCUUUAGCGACCGACCGUCCGUUGCUAAUAUUGUAUAUUUAGCGACCAACCGUGGAUUGUUGUACUAUCGAUUUAGCAACCAACCGUAAG