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BaseInfo

ncRNA ID	novel_zma_miR3570
Species	Zea mays
Class	miRNA
Genome position	Chr7:47966457-47966530 [-]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287159;SRR5451003;SRR5451004
Length	24
Mature sequence(if miRNA)	51 - CCCGGAAGGAUUGGAGGGGAUUGA - 74
Stem-loop(if miRNA)	--     A         -    A             UA   CCCGG AGGAUUGGA GGGG UUGAGGGGGAAAU  G   ||||| ||||||||| |||| |||||||||||||   GGGCC UCCUAACCU CCCC AACUCCCCCUUUA  U UA     C         A    -             UU
Stem-loop sequence	CCCGGAAGGAUUGGAGGGGAUUGAGGGGGAAAUUAGUUUAUUUCCCCCUCAACCCCAUCCAAUCCUCCCGGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163816.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   ||||||||||||||||||||||*| targets:36   UCAAUCCCCUCCAAUCCUUCCGUG   59 Target Full Sequence	1.5	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
HI403355.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   ||||||||||||||||||||||*| targets:36   UCAAUCCCCUCCAAUCCUUCCGUG   59 Target Full Sequence	1.5	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   ||||||||||||||||||||||*| targets:36   UCAAUCCCCUCCAAUCCUUCCGUG   59 Target Full Sequence	1.5	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241793.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:73   UUAAUCCCCUUCAAUCCUCCCGGG   96 Target Full Sequence	2.5	Sequence 7788 from Patent EP2985353	NA	coding protein	psRNATarget
JB170124.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:73   UUAAUCCCCUUCAAUCCUCCCGGG   96 Target Full Sequence	2.5	Sequence 7788 from Patent EP2559767	NA	coding protein	psRNATarget
HI409663.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:73   UUAAUCCCCUUCAAUCCUCCCGGG   96 Target Full Sequence	2.5	Sequence 7788 from Patent EP2074227	NA	coding protein	psRNATarget
EU961132.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:827   UUAAUCCCCUUCAAUCCUCCCGGG   850 Target Full Sequence	2.5	Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds	NA	coding protein	psRNATarget
BT040716.2	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:866   UUAAUCCCCUUCAAUCCUCCCGGG   889 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds	NA	coding protein	psRNATarget
BT066291.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:871   UUAAUCCCCUUCAAUCCUCCCGGG   894 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147738.1	ncRNA:24   AGUUAGGGGAGGUUAGGAAGGCCC   1   |=||||||||=|||||||*||||| targets:871   UUAAUCCCCUUCAAUCCUCCCGGG   894 Target Full Sequence	2.5	Zea mays putative glutathione peroxidase (LOC100273297), mRNA	NA	coding protein	psRNATarget