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BaseInfo

ncRNA ID novel_zma_miR3565
Species Zea mays
Class miRNA
Genome position Chr7:131555070-131555151 [-]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 1 - GCGGAUACGGAAACGGGAGAGGGG - 24
Stem-loop(if miRNA) --  G             UC   ---AC    -C    CC  A
  CC CUCCCGUUUCCGU  CCG     UAUU  CGGA  CG A
  || |||||||||||||  |||     ||||  ||||  ||
  GG GAGGGCAAAGGCA  GGC     AUAG  GCCU  GC C
GG  A             UA   GUAAA    UA    UU  C
Stem-loop sequence CCGCUCCCGUUUCCGUUCCCGACUAUUCCGGACCCGAACCCGUUUCCGAUGAUAAAAUGCGGAUACGGAAACGGGAGAGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020543912.1
ncRNA:24   GGGGAGAGGGCAAAGGCAUAGGCG   1
  ||||||||||||||||*|||||||
targets:5704   CCCCUCUCCCGUUUCCAUAUCCGC   5727

1.5 PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA NA coding protein psRNATarget