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BaseInfo

ncRNA ID novel_zma_miR3561
Species Zea mays
Class miRNA
Genome position Chr7:159066148-159066234 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287160;SRR1997866
Length 24
Mature sequence(if miRNA) 64 - AAAGAUCUAAACAGAAAGGGCUAA - 87
Stem-loop(if miRNA) --AAAGAUC      G          AAUGACUA     AUAC
         UAAACA AAAGGGCUAA        AAAUG    U
         |||||| ||||||||||        |||||    U
         GUUUGU UUUCUCGAUU        UUUAC    U
GAUUUAUAA      A          GGCAUUAA     CAUU
Stem-loop sequence AAAGAUCUAAACAGAAAGGGCUAAAAUGACUAAAAUGAUACUUUUUACCAUUUAAUUACGGUUAGCUCUUUAUGUUUGAAUAUUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943657.1
ncRNA:24   AAUCGGGAAAGACAAAUCUAGAAA   1
  ||=**||||||||||*|||||||*
targets:868   UUGUACCUUUCUGUUGAGAUCUUC   891

2.5 Zea mays clone 1674256 mRNA sequence NA coding protein psRNATarget