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BaseInfo

ncRNA ID	novel_zma_miR3545
Species	Zea mays
Class	miRNA
Genome position	Chr6:104090717-104090795 [+]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	1 - AGACACUCGGCAAAGCAGAUUCUU - 24
Stem-loop(if miRNA)	--     C         C G                  CA   AGACA UCGGCAAAG A AUUCUUUGCCGAGUGUCA  U   ||||| ||||||||| | ||||||||||||||||||   UCUGU AGCCGUUUC U UGAGAAAUGGCUCACGGU  A AU     C         - G                  CA
Stem-loop sequence	AGACACUCGGCAAAGCAGAUUCUUUGCCGAGUGUCACAUAACUGGCACUCGGUAAAGAGUGUCUUUGCCGACUGUCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166953.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   ||-|=|=||=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	2.0	Sequence 4617 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238622.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   ||-|=|=||=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	2.0	Sequence 4617 from Patent EP2985353	NA	coding protein	psRNATarget
HI406492.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   ||-|=|=||=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	2.0	Sequence 4617 from Patent EP2074227	NA	coding protein	psRNATarget
HI406041.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   =*|||*||*||||||||||||||| targets:135   GCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	2.0	Sequence 4166 from Patent EP2074227	NA	coding protein	psRNATarget
JB166502.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   =*|||*||*||||||||||||||| targets:135   GCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	2.0	Sequence 4166 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238171.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   =*|||*||*||||||||||||||| targets:135   GCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	2.0	Sequence 4166 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238333.1	ncRNA:24   UUCU-UAGACGAAACGGCUCACAGA   1   ||||-|*||*||||||||||||||* targets:44   AAGAUAACUCCUUUGCCGAGUGUCA   68 Target Full Sequence	3.0	Sequence 4328 from Patent EP2985353	NA	coding protein	psRNATarget
JB166664.1	ncRNA:24   UUCU-UAGACGAAACGGCUCACAGA   1   ||||-|*||*||||||||||||||* targets:44   AAGAUAACUCCUUUGCCGAGUGUCA   68 Target Full Sequence	3.0	Sequence 4328 from Patent EP2559767	NA	coding protein	psRNATarget
HI406203.1	ncRNA:24   UUCU-UAGACGAAACGGCUCACAGA   1   ||||-|*||*||||||||||||||* targets:44   AAGAUAACUCCUUUGCCGAGUGUCA   68 Target Full Sequence	3.0	Sequence 4328 from Patent EP2074227	NA	coding protein	psRNATarget