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BaseInfo

ncRNA ID novel_zma_miR3540
Species Zea mays
Class miRNA
Genome position Chr6:58016511-58016598 [+]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 65 - GUCUGAAUGGAAUAGUAGGGUGCU - 88
Stem-loop(if miRNA) --      -       -C UG   ----   -   -   -   --   U
  CACUCU CUGUUUU  U  GAC    GAA AUU GCA UCA  AUG C
  |||||| |||||||  |  |||    ||| ||| ||| |||  ||| U
  GUGGGA GAUAAGG  A  CUG    UUU UAA CGU AGU  UAC C
UC      U       UA GU   UACA   C   U   U   CA   A
Stem-loop sequence CACUCUCUGUUUUCUUGGACGAAAUUGCAUCAAUGUCUCACAUACUGAUUGCUAAUCUUUACAUGUCUGAAUGGAAUAGUAGGGUGCU