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BaseInfo

ncRNA ID novel_zma_miR3532
Species Zea mays
Class miRNA
Genome position Chr6:107322707-107322775 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - AACGACAAAUAAAAAGAAACGGAG - 24
Stem-loop(if miRNA) --                    CUG         A
  CCGUUUCUUUUUAUUUGUCG   GAUAGUGUA U
  ||||||||||||||||||||   |||||||||
  GGCAAAGAAAAAUAAACAGC   CUAUCACGU U
GA                    -AA         U
Stem-loop sequence CCGUUUCUUUUUAUUUGUCGCUGGAUAGUGUAAUUUUGCACUAUCAACGACAAAUAAAAAGAAACGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170476.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||||
targets:10   CUCUGUUUCUUUUUAUUUGUCGUU   33

0.0 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
HI410015.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||||
targets:10   CUCUGUUUCUUUUUAUUUGUCGUU   33

0.0 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||||
targets:10   CUCUGUUUCUUUUUAUUUGUCGUU   33

0.0 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2149   CUCCGUUUCUUUUUAGUUGUCGUU   2172

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2211   CUCCGUUUCUUUUUAGUUGUCGUU   2234

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2250   CUCCGUUUCUUUUUAGUUGUCGUU   2273

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2225   CUCCGUUUCUUUUUAGUUGUCGUU   2248

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2170   CUCCGUUUCUUUUUAGUUGUCGUU   2193

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2211   CUCCGUUUCUUUUUAGUUGUCGUU   2234

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2232   CUCCGUUUCUUUUUAGUUGUCGUU   2255

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2232   CUCCGUUUCUUUUUAGUUGUCGUU   2255

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2232   CUCCGUUUCUUUUUAGUUGUCGUU   2255

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2211   CUCCGUUUCUUUUUAGUUGUCGUU   2234

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2211   CUCCGUUUCUUUUUAGUUGUCGUU   2234

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:3704   CUCCGUUUCUUUUUAUUUGUCGCU   3727

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:2211   CUCCGUUUCUUUUUAGUUGUCGUU   2234

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:2925   CUCCGUUUCUUUUUAUUUGUCGCU   2948

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:2819   CUCCGUUUCUUUUUAUUUGUCGCU   2842

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:2802   CUCCGUUUCUUUUUAUUUGUCGCU   2825

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1469   CUCCGUUUCUUUUUAUUUGUCGCU   1492

1.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:2441   CUCCGUUUCUUUUUAUUUGUCGCU   2464

1.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:2502   CUCCGUUUCUUUUUAUUUGUCGCU   2525

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001196908.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:778   CUCCGUUUCUUUUUAUUUGUCGCU   801

1.5 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
BT088136.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:778   CUCCGUUUCUUUUUAUUUGUCGCU   801

1.5 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1549   CUCCGUUUCUUUUUAUUUGUCGCU   1572

1.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1533   CUCCGUUUCUUUUUAUUUGUCGCU   1556

1.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1278   CUCCGUUUCUUUUUAUUUGUCGCU   1301

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1361   CUCCGUUUCUUUUUAUUUGUCGCU   1384

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:147   CUCCGUUUCUUUUUAUUUGUCGCU   170

1.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1294   CUCCGUUUCUUUUUAUUUGUCGCU   1317

1.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1294   CUCCGUUUCUUUUUAUUUGUCGCU   1317

1.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:1172   CUCCGUUUCUUUUUAUUUGUCGCU   1195

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:236   CUCCGUUUCUUUUUAUUUGUCGCU   259

1.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:575   CUCCGUUUCUUUUUAUUUGUCGCU   598

1.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:575   CUCCGUUUCUUUUUAUUUGUCGCU   598

1.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU964901.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:503   CUCCGUUUCUUUUUAUUUGUCGCU   526

1.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
JB163862.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||*|||||
targets:17   CUCCGUUUCUUUUUAUUUAUCGUU   40

1.5 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
HI403369.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

1.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||*|||||
targets:17   CUCCGUUUCUUUUUAUUUAUCGUU   40

1.5 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
JB163830.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

1.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

1.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403401.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||*|||||
targets:17   CUCCGUUUCUUUUUAUUUAUCGUU   40

1.5 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
HI403294.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

1.5 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
JB163755.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

1.5 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

1.5 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
JB170060.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
HI409599.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
HI407270.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCUUUUUAGUUGUCGUU   35

1.5 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
JB167731.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCUUUUUAGUUGUCGUU   35

1.5 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
LQ239400.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCUUUUUAGUUGUCGUU   35

1.5 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
JB170422.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
LQ240748.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI409699.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
HI408570.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB169079.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
HI409961.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
JB170657.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
HI409328.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
HI410196.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170077.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
HI408710.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
HI408618.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
HI409615.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
LQ241745.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

1.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI408854.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30

1.5 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ240984.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30

1.5 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||*|
targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30

1.5 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI405824.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||||*||||||
targets:6   CUCCGUUUCUUUUUAUUAGUCGUU   29

1.5 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
LQ237954.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||||*||||||
targets:6   CUCCGUUUCUUUUUAUUAGUCGUU   29

1.5 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
JB166285.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||||||||||||*||||||
targets:6   CUCCGUUUCUUUUUAUUAGUCGUU   29

1.5 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
HI403356.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||**
targets:17   CUCCGUUUCUUUUUAUUUGUCGCC   40

2.5 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
LQ235486.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||**
targets:17   CUCCGUUUCUUUUUAUUUGUCGCC   40

2.5 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
JB163817.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||||||||||||||||||||**
targets:17   CUCCGUUUCUUUUUAUUUGUCGCC   40

2.5 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
EU957018.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:2006   CUCUGUUUCUUUUUAUUUGUCGCU   2029

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1272   CUCUGUUUCUUUUUAUUUGUCGCU   1295

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1408   CUCUGUUUCUUUUUAUUUGUCGCU   1431

1.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1408   CUCUGUUUCUUUUUAUUUGUCGCU   1431

1.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1227   CUCUGUUUCUUUUUAUUUGUCGCU   1250

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
BT088158.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1208   CUCUGUUUCUUUUUAUUUGUCGCU   1231

1.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
EU973028.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1174   CUCUGUUUCUUUUUAUUUGUCGCU   1197

1.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1068   CUCUGUUUCUUUUUAUUUGUCGCU   1091

1.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
BT068381.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:1115   CUCUGUUUCUUUUUAUUUGUCGCU   1138

1.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
JB169555.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30

1.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
HI409094.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30

1.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||=||||||||||||||||||*|
targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30

1.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
BT060773.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:1011   CUCCGUUCUUUUUUAUUUGUCGUG   1034

3.0 Zea mays full-length cDNA clone ZM_BFb0047M13 mRNA, complete cds NA coding protein psRNATarget
NM_001196819.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:905   CUCCGUUCUUUUUUAUUUGUCGUG   928

3.0 Zea mays Acyl-acyl carrier protein thioesterase ATL3 chloroplastic (LOC100502341), mRNA NA coding protein psRNATarget
BT087866.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:905   CUCCGUUCUUUUUUAUUUGUCGUG   928

3.0 Zea mays full-length cDNA clone ZM_BFb0271N24 mRNA, complete cds NA coding protein psRNATarget
NM_001152046.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  =||||||||||||||*|||||||*
targets:834   UUCCGUUUCUUUUUAGUUGUCGUC   857

2.5 Zea mays uncharacterized LOC100278927 (LOC100278927), mRNA NA coding protein psRNATarget
EU976025.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  =||||||||||||||*|||||||*
targets:834   UUCCGUUUCUUUUUAGUUGUCGUC   857

2.5 Zea mays clone 508899 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU976954.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:775   CUCCGUUCUUUUUUAUUUGUCGUG   798

3.0 Zea mays clone 994728 mRNA sequence NA coding protein psRNATarget
NM_001326549.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:766   CUCCGUUCUUUUUUAUUUGUCGUG   789

3.0 Zea mays Acyl-acyl carrier protein thioesterase ATL3 chloroplastic (LOC100502341), transcript variant 1, mRNA NA coding protein psRNATarget
LQ239061.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:9   CUCCGUUCUUUUUUAUUUGUCGUG   32

3.0 Sequence 5056 from Patent EP2985353 NA coding protein psRNATarget
HI406931.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:9   CUCCGUUCUUUUUUAUUUGUCGUG   32

3.0 Sequence 5056 from Patent EP2074227 NA coding protein psRNATarget
JB167392.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  |||||||*=||||||||||||||*
targets:9   CUCCGUUCUUUUUUAUUUGUCGUG   32

3.0 Sequence 5056 from Patent EP2559767 NA coding protein psRNATarget
EZ061437.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  ||||*|||||||||||||||||*|
targets:174   CUCCAUUUCUUUUUAUUUGUCGCU   197

1.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
NM_001148845.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  *|=||||*=|||||||||||||||
targets:1093   AUUCGUUCUUUUUUAUUUGUCGUU   1116

2.0 Zea mays putative carboxylesterase 2 (LOC100274486), mRNA NA coding protein psRNATarget
BT043172.1
ncRNA:24   GAGGCAAAGAAAAAUAAACAGCAA   1
  *|=||||*=|||||||||||||||
targets:1093   AUUCGUUCUUUUUUAUUUGUCGUU   1116

2.0 Zea mays full-length cDNA clone ZM_BFc0118C01 mRNA, complete cds NA coding protein psRNATarget
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