ncRNA ID | novel_zma_miR3530 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:160388356-160388445 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287031 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUAAAAUGUCAUAACACCGUUGGA - 24 |
Stem-loop(if miRNA) |
--              UC    UUUUU    AAC   A  -AA    A   UAACGGUGUUGUGG  UUUU     AAUG   AGC CC   CAUG A   ||||||||||||||  ||||     ||||   ||| ||   |||| G   GUUGCCACAAUACU  AAAA     UUAU   UCG GG   GUGC A AG              GU    --UGU    ---   -  AGG    G |
Stem-loop sequence | UAACGGUGUUGUGGUCUUUUUUUUUAAUGAACAGCACCAACAUGAAGAGCGUGGGAGGGCUUAUUUGUAAAAUGUCAUAACACCGUUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008664717.2 |
|
2.5 | PREDICTED: Zea mays tRNA (cytosine(34)-C(5))-methyltransferase (LOC103641349), transcript variant X5, mRNA | NA | coding protein | psRNATarget |