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BaseInfo

ncRNA ID novel_zma_miR3528
Species Zea mays
Class miRNA
Genome position Chr6:170549796-170549871 [-]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 1 - ACAACUAAAACGAAACGGAGGGAA - 24
Stem-loop(if miRNA) --           --                    U  A
  CUCUUCGUUUU  UUUAGUUGUCGCUGGAUAGU CA U
  |||||||||||  |||||||||||||||||||| ||
  GGGAGGCAAAG  AAAUCAACAGCGACCUAUCA GU U
AA           CA                    C  U
Stem-loop sequence CUCUUCGUUUUUUUAGUUGUCGCUGGAUAGUUCAAUUUUGCACUAUCCAGCGACAACUAAAACGAAACGGAGGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241364.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:5   CUCCCUCCGUUUCGUUUUAGUUGU   28

0.0 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
JB169695.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:5   CUCCCUCCGUUUCGUUUUAGUUGU   28

0.0 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
HI409234.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:5   CUCCCUCCGUUUCGUUUUAGUUGU   28

0.0 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
LQ239399.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5394 from Patent EP2985353 NA coding protein psRNATarget
JB167730.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5394 from Patent EP2559767 NA coding protein psRNATarget
HI407269.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5394 from Patent EP2074227 NA coding protein psRNATarget
LQ239341.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5336 from Patent EP2985353 NA coding protein psRNATarget
HI407324.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
HI407211.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5336 from Patent EP2074227 NA coding protein psRNATarget
JB167672.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5336 from Patent EP2559767 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167785.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
JB167766.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407305.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
HI407230.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
JB167691.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:8   CUCCCUCCGUUUCGUUUUAGUUGU   31

0.0 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
BT062468.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:573   CUCCCUCCGUUUCGUUUUAGUUGU   596

0.0 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
BT055583.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:837   CUCCCUCCGUUUCGUUUUAGUUGU   860

0.0 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
NM_001153043.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:837   CUCCCUCCGUUUCGUUUUAGUUGU   860

0.0 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
EU968044.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1026   CUCCCUCCGUUUCGUUUUAGUUGU   1049

0.0 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:914   CUCCCUCCGUUUCGUUUUAGUUGU   937

0.0 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
EU971616.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1164   CUCCCUCCGUUUCGUUUUAGUUGU   1187

0.0 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_020549872.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1267   CUCCCUCCGUUUCGUUUUAGUUGU   1290

0.0 PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA NA coding protein psRNATarget
BT065656.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1434   CUCCCUCCGUUUCGUUUUAGUUGU   1457

0.0 Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds NA coding protein psRNATarget
NM_001175582.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1434   CUCCCUCCGUUUCGUUUUAGUUGU   1457

0.0 Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1517   CUCCCUCCGUUUCGUUUUAGUUGU   1540

0.0 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||||||||||||||||||||
targets:1517   CUCCCUCCGUUUCGUUUUAGUUGU   1540

0.0 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
HI410051.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||=|||||||||||||||||
targets:3   CUCCCUUCGUUUCGUUUUAGUUGU   26

1.0 Sequence 8176 from Patent EP2074227 NA coding protein psRNATarget
JB170512.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||=|||||||||||||||||
targets:3   CUCCCUUCGUUUCGUUUUAGUUGU   26

1.0 Sequence 8176 from Patent EP2559767 NA coding protein psRNATarget
LQ242181.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||||=|||||||||||||||||
targets:3   CUCCCUUCGUUUCGUUUUAGUUGU   26

1.0 Sequence 8176 from Patent EP2985353 NA coding protein psRNATarget
EZ065373.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||=|||||||||||||||||||
targets:280   CUCCUUCCGUUUCGUUUUAGUUGU   303

0.0 TSA: Zea mays contig01006, mRNA sequence NA coding protein psRNATarget
EU945792.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|=|||||||||||||||||||||
targets:1180   CUUCCUCCGUUUCGUUUUAGUUGU   1203

0.0 Zea mays clone 285684 mRNA sequence NA coding protein psRNATarget
EU964554.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|=|||||||||||||||||||||
targets:1329   CUUCCUCCGUUUCGUUUUAGUUGU   1352

0.0 Zea mays clone 279840 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU971439.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||=||||||||||||||||||||
targets:2115   CUCUCUCCGUUUCGUUUUAGUUGU   2138

0.0 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||=||||||||||||||||||||
targets:2115   CUCUCUCCGUUUCGUUUUAGUUGU   2138

0.0 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||=||||||||||||||||
targets:2530   CUCCCUCUGUUUCGUUUUAGUUGU   2553

1.0 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008667486.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|=|=|||||||||||||||||||
targets:1335   CUUCUUCCGUUUCGUUUUAGUUGU   1358

0.0 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
HI407270.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:8   CUCCCUCCGUUUCUUUUUAGUUGU   31

1.5 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
JB167731.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:8   CUCCCUCCGUUUCUUUUUAGUUGU   31

1.5 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
LQ239400.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:8   CUCCCUCCGUUUCUUUUUAGUUGU   31

1.5 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
JB163860.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAGUUGU   36

1.5 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
JB163748.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAGUUGU   36

1.5 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAGUUGU   36

1.5 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
HI403287.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAGUUGU   36

1.5 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
HI403399.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAGUUGU   36

1.5 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAGUUGU   36

1.5 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
EZ112557.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:50   CUCCCUCCGUUUCUUUUUAGUUGU   73

1.5 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
BT062074.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1139   CUCCCUCCGUUUCUUUUUAGUUGU   1162

1.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1227   CUCCCUCCGUUUCUUUUUAGUUGU   1250

1.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1222   CUCCCUCCGUUUCUUUUUAGUUGU   1245

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1237   CUCCCUCCGUUUCUUUUUAGUUGU   1260

1.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1251   CUCCCUCCGUUUCUUUUUAGUUGU   1274

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1303   CUCCCUCCGUUUCUUUUUAGUUGU   1326

1.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1305   CUCCCUCCGUUUCUUUUUAGUUGU   1328

1.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1411   CUCCCUCCGUUUCUUUUUAGUUGU   1434

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1153   CUCCCUCCGUUUCUUUUUAGUUGU   1176

1.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2000   CUCCCUCCGUUUCUUUUUAGUUGU   2023

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2031   CUCCCUCCGUUUCUUUUUAGUUGU   2054

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2059   CUCCCUCCGUUUCUUUUUAGUUGU   2082

1.5 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2113   CUCCCUCCGUUUCUUUUUAGUUGU   2136

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2144   CUCCCUCCGUUUCUUUUUAGUUGU   2167

1.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:1454   CUCCCUCCGUUUCUUUUUAGUUGU   1477

1.5 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2207   CUCCCUCCGUUUCUUUUUAGUUGU   2230

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2207   CUCCCUCCGUUUCUUUUUAGUUGU   2230

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2207   CUCCCUCCGUUUCUUUUUAGUUGU   2230

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2228   CUCCCUCCGUUUCUUUUUAGUUGU   2251

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2228   CUCCCUCCGUUUCUUUUUAGUUGU   2251

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2228   CUCCCUCCGUUUCUUUUUAGUUGU   2251

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2207   CUCCCUCCGUUUCUUUUUAGUUGU   2230

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2166   CUCCCUCCGUUUCUUUUUAGUUGU   2189

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2221   CUCCCUCCGUUUCUUUUUAGUUGU   2244

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2246   CUCCCUCCGUUUCUUUUUAGUUGU   2269

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2207   CUCCCUCCGUUUCUUUUUAGUUGU   2230

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||||||||||||*||||||||||
targets:2145   CUCCCUCCGUUUCUUUUUAGUUGU   2168

1.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
EZ089411.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||*|||||||=|||||||||||
targets:309   CUCCAUCCGUUUUGUUUUAGUUGU   332

1.5 TSA: Zea mays contig25057, mRNA sequence NA coding protein psRNATarget
JB170144.1
ncRNA:21   GGAGGCAAAGCAAAAUCAACA   1
  |||||||||=|||||||||||
targets:1   CCUCCGUUUUGUUUUAGUUGU   21

1.5 Sequence 7808 from Patent EP2559767 NA coding protein psRNATarget
HI409683.1
ncRNA:21   GGAGGCAAAGCAAAAUCAACA   1
  |||||||||=|||||||||||
targets:1   CCUCCGUUUUGUUUUAGUUGU   21

1.5 Sequence 7808 from Patent EP2074227 NA coding protein psRNATarget
LQ241813.1
ncRNA:21   GGAGGCAAAGCAAAAUCAACA   1
  |||||||||=|||||||||||
targets:1   CCUCCGUUUUGUUUUAGUUGU   21

1.5 Sequence 7808 from Patent EP2985353 NA coding protein psRNATarget
EU957761.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  ||==*|||||||=|||||||||||
targets:294   UUUUAUCCGUUUUGUUUUAGUUGU   317

1.5 Zea mays clone 1614826 mRNA sequence NA coding protein psRNATarget
NM_001352327.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|||=||=|||||*||||||||||
targets:2671   CUCCUUCUGUUUCUUUUUAGUUGU   2694

2.5 Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA NA coding protein psRNATarget
JB166319.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  ||||=|||*||||*||||||||||
targets:10   UUCCUUCCAUUUCUUUUUAGUUGU   33

2.5 Sequence 3983 from Patent EP2559767 NA coding protein psRNATarget
LQ237988.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  ||||=|||*||||*||||||||||
targets:10   UUCCUUCCAUUUCUUUUUAGUUGU   33

2.5 Sequence 3983 from Patent EP2985353 NA coding protein psRNATarget
HI405858.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  ||||=|||*||||*||||||||||
targets:10   UUCCUUCCAUUUCUUUUUAGUUGU   33

2.5 Sequence 3983 from Patent EP2074227 NA coding protein psRNATarget
NM_001305845.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  ||||=|||*||||*||||||||||
targets:2222   UUCCUUCCAUUUCUUUUUAGUUGU   2245

2.5 Zea mays uncharacterized LOC542022 (LOC542022), mRNA NA coding protein psRNATarget
HI406357.1
ncRNA:23   AGGGAGGCAAAGCAAAAUCAACA   1
  |==|||=|||||*||||||||||
targets:1   UUUCUCUGUUUCUUUUUAGUUGU   23

2.5 Sequence 4482 from Patent EP2074227 NA coding protein psRNATarget
JB166818.1
ncRNA:23   AGGGAGGCAAAGCAAAAUCAACA   1
  |==|||=|||||*||||||||||
targets:1   UUUCUCUGUUUCUUUUUAGUUGU   23

2.5 Sequence 4482 from Patent EP2559767 NA coding protein psRNATarget
LQ238487.1
ncRNA:23   AGGGAGGCAAAGCAAAAUCAACA   1
  |==|||=|||||*||||||||||
targets:1   UUUCUCUGUUUCUUUUUAGUUGU   23

2.5 Sequence 4482 from Patent EP2985353 NA coding protein psRNATarget
EZ080914.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *||*|||||||||||||||*||||
targets:110   CUCACUCCGUUUCGUUUUAAUUGU   133

1.5 TSA: Zea mays contig16553, mRNA sequence NA coding protein psRNATarget
NM_001152046.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|===||||||||*||||||||||
targets:830   CUUUUUCCGUUUCUUUUUAGUUGU   853

1.5 Zea mays uncharacterized LOC100278927 (LOC100278927), mRNA NA coding protein psRNATarget
EU976025.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|===||||||||*||||||||||
targets:830   CUUUUUCCGUUUCUUUUUAGUUGU   853

1.5 Zea mays clone 508899 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU955357.1
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|==||=||||||*||||||||||
targets:1258   GUUUCUUCGUUUCUUUUUAGUUGU   1281

2.5 Zea mays clone 1529261 senescence-inducible chloroplast stay-green protein 1 mRNA, complete cds; nuclear gene for chloroplast product NA coding protein psRNATarget
NM_001112301.2
ncRNA:24   AAGGGAGGCAAAGCAAAAUCAACA   1
  *|==||=||||||*||||||||||
targets:1320   GUUUCUUCGUUUCUUUUUAGUUGU   1343

2.5 Zea mays senescence-inducible chloroplast stay-green protein 2 (SGR2), mRNA NA coding protein psRNATarget
EU957363.1
ncRNA:24   AA---GGGAGGCAAAGCAAAAUCAACA   1
  ||---|=|||=|||||*||||||||||
targets:466   UUACCCUCUCUGUUUCUUUUUAGUUGU   492

2.5 Zea mays clone 1589847 mRNA sequence NA coding protein psRNATarget
HI409551.1
ncRNA:20   GAGGCAAAGC-AAAAUCAACA   1
  ||||||||||-||||||||||
targets:1   CUCCGUUUCGGUUUUAGUUGU   21

3.0 Sequence 7676 from Patent EP2074227 NA coding protein psRNATarget
LQ241681.1
ncRNA:20   GAGGCAAAGC-AAAAUCAACA   1
  ||||||||||-||||||||||
targets:1   CUCCGUUUCGGUUUUAGUUGU   21

3.0 Sequence 7676 from Patent EP2985353 NA coding protein psRNATarget
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