ncRNA ID | novel_zma_miR3522 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:133575173-133575271 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287159 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GAGGUCUGGUUAGAAAGGGGC - 21 |
Stem-loop(if miRNA) |
-- AG   UG    GAA      UUAAUUC    A    UU   AGG  UACA   G  GUC  GUUA   AGGGGC       UCUG UUGC  UGG   CC    U   |  |||  ||||   ||||||       |||| ||||  |||   ||   C  UAG  CAAU   UUUCUG       AGAC AACG  ACC   GG    U AU CU   GU    -AG      ----UGU    -    CC   -AA  UUUA |
Stem-loop sequence | GAGGUCUGGUUAGAAAGGGGCUUAAUUCUCUGAUUGCUUUGGAGGCCUACAUUAUUUGGAACCACCGCAACAGAUGUGUCUUUGAUAACUGGAUUCCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020551711.1 |
|
1.5 | PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X4, mRNA | NA | coding protein | psRNATarget |