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BaseInfo

ncRNA ID novel_zma_miR3516
Species Zea mays
Class miRNA
Genome position Chr5:97993088-97993165 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287162
Length 24
Mature sequence(if miRNA) 55 - AUGGUCGGUCGCUAUAUAGGUAAG - 78
Stem-loop(if miRNA) --   G U         A U          C    AG C
  UGC U UAUAGCGAC G CUGUGGGUCG UAAA  U U
  ||| | ||||||||| | |||||||||| ||||  |
  AUG A AUAUCGCUG C GGUAUUCAGC AUUU  A A
GA   G U         G U          A    AA G
Stem-loop sequence UGCGUUUAUAGCGACAGUCUGUGGGUCGCUAAAAGUCUAGAAAUUUAACGACUUAUGGUCGGUCGCUAUAUAGGUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671624.2
ncRNA:24   GAAUGGAUAUAUCGCUGGCUGGUA   1
  |||||||*||||||||||*|||||
targets:68   CUUACCUCUAUAGCGACCCACCAU   91

2.5 PREDICTED: Zea mays Transcription repressor OFP6 (LOC103647057), mRNA NA coding protein psRNATarget