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BaseInfo

ncRNA ID novel_zma_miR3500
Species Zea mays
Class miRNA
Genome position Chr10:98412771-98412853 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR5451006
Length 24
Mature sequence(if miRNA) 60 - ACCUGGGACACUCGGCAAAGACGC - 83
Stem-loop(if miRNA) --U             C G     CA               U
   UCUUUGUCGAGUG U UCAGG  GACACUCGGCAAAGG A
   ||||||||||||| | |||||  ||||||||||||||| A
   AGAAACGGCUCAC A GGUCC  CUGUGAGCCGUUUUC C
CGC             - G     -A               U
Stem-loop sequence UUCUUUGUCGAGUGCUGUCAGGCAGACACUCGGCAAAGGUAACUCUUUUGCCGAGUGUCACCUGGGACACUCGGCAAAGACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   CGCAGAAACGGCUCACAGGGUCCA   1
  ****|||||||||||||||*||||
targets:1444   AAUACUUUGCCGAGUGUCCAAGGU   1467

1.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget