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BaseInfo

ncRNA ID osa-miR395u
Species Oryza sativa
Class miRNA
Genome position Chr9:6606701-6606786 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - GUGAAGCGUUUGGGGGAAAUC - 31
Stem-loop(if miRNA) ---      CCA   A      U     AA     GA      AUU
   ACACUG   GGA UUCCCU CAAGC  UUCAU  AACAAU   U
   ||||||   ||| |||||| |||||  |||||  ||||||   U
   UGUGAC   UCU AAGGGG GUUUG  AAGUG  UUGUUG   G
CGC      ---   A      -     CG     --      AGA
Stem-loop sequence ACACUGCCAGGAAUUCCCUUCAAGCAAUUCAUGAAACAAUAUUUUGAGAGUUGUUGUGAAGCGUUUGGGGGAAAUCUCAGUGUCGC

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).
2 PMID:16117853
"Molecular evolution of the rice miR395 gene family";
Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L;
Cell Res. 15:631-638(2005).