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BaseInfo

ncRNA ID novel_zma_miR3497
Species Zea mays
Class miRNA
Genome position Chr5:25705138-25705202 [+]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 42 - GGUUUAGGGCUUAUUCUCGUCGGU - 65
Stem-loop(if miRNA) --                             A
  CGACGGGAAUAAGCCCUAAACCGACGGGA U
  ||||||||||||||||||||||||||||| U
  GCUGCUCUUAUUCGGGAUUUGGCUGCCCU A
UG                             U
Stem-loop sequence CGACGGGAAUAAGCCCUAAACCGACGGGAAUUAUUCCCGUCGGUUUAGGGCUUAUUCUCGUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ240820.1
ncRNA:24   UGGCUGCUCUUAUUCGGGAUUUGG   1
  |||||||=||||||||||||||||
targets:15   ACCGACGGGAAUAAGCCCUAAACC   38

1.0 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget
HI408690.1
ncRNA:24   UGGCUGCUCUUAUUCGGGAUUUGG   1
  |||||||=||||||||||||||||
targets:15   ACCGACGGGAAUAAGCCCUAAACC   38

1.0 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
JB169151.1
ncRNA:24   UGGCUGCUCUUAUUCGGGAUUUGG   1
  |||||||=||||||||||||||||
targets:15   ACCGACGGGAAUAAGCCCUAAACC   38

1.0 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget