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BaseInfo

ncRNA ID novel_zma_miR3492
Species Zea mays
Class miRNA
Genome position Chr5:206757662-206757743 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287162;SRR2287163;SRR4237220;SRR4237221;SRR4237224;SRR4237226
Length 21
Mature sequence(if miRNA) 62 - UGAGAGAAUGGUAUAAUCACA - 82
Stem-loop(if miRNA) --        UG                        CUUUC
  UGAGAGAA  GUAUAAUCACAAUUAAUCCUGAAA     A
  ||||||||  ||||||||||||||||||||||||
  ACUCUCUU  CAUAUUAGUGUUAAUUAGGGCUUU     A
CC        CA                        UUUAC
Stem-loop sequence UGAGAGAAUGGUAUAAUCACAAUUAAUCCUGAAACUUUCAACAUUUUUUCGGGAUUAAUUGUGAUUAUACACUUCUCUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020549631.1
ncRNA:21   ACACUAAUAUGGUAAGAGAGU   1
  **||||*||||||||*|||||
targets:1045   CCUGAUGAUACCAUUGUCUCA   1065

2.5 PREDICTED: Zea mays uncharacterized LOC100277245 (LOC100277245), transcript variant X1, mRNA NA coding protein psRNATarget