ncRNA ID | novel_zma_miR3491 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:191677981-191678074 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287164;SRR4237221 |
Length | 23 |
Mature sequence(if miRNA) | 72 - AGAAGCGCACAGAUGAAGUCGGG - 94 |
Stem-loop(if miRNA) |
--     G   G                    G  G   CG     U   CGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GGU  CUAAG G   ||||| ||| |||||||||||||||||||| || |||  |||||   GCUGA GUA ACACGCGAAGAGAAGAGAAU CA CCG  GAUUC A GG     A   G                    A  G   AU     U |
Stem-loop sequence | CGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGUCGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGUCGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |