ncRNA ID | osa-miR395v |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:6606575-6606643 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 1 - GUGAAGUAUUUGGCGGAACUC - 21 |
Stem-loop(if miRNA) |
  A    CU     C        -    A AAUU GA UUCU  UUAAG ACUUCAUA CGAC C    A || ||||  ||||| |||||||| |||| |    U CU AAGG  GGUUU UGAAGUGU GUUG G    U   C    -C     A        U    G AACU |
Stem-loop sequence | GAAUUCUCUUUAAGCACUUCAUACGACACAAUUAUUUCAAGGGUUGUUGUGAAGUAUUUGGCGGAACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK066736.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J013088O16, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015772701.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group probable galacturonosyltransferase 7 (LOC4332727), mRNA | probable galacturonosyltransferase 7(LOC4332727) | coding protein | psRNATarget |
1 | PMID:16117853
"Molecular evolution of the rice miR395 gene family"; Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L; Cell Res. 15:631-638(2005). |