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BaseInfo

ncRNA ID osa-miR395v
Species Oryza sativa
Class miRNA
Genome position Chr9:6606575-6606643 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 1 - GUGAAGUAUUUGGCGGAACUC - 21
Stem-loop(if miRNA)   A    CU     C        -    A AAUU
GA UUCU  UUAAG ACUUCAUA CGAC C    A
|| ||||  ||||| |||||||| |||| |    U
CU AAGG  GGUUU UGAAGUGU GUUG G    U
  C    -C     A        U    G AACU
Stem-loop sequence GAAUUCUCUUUAAGCACUUCAUACGACACAAUUAUUUCAAGGGUUGUUGUGAAGUAUUUGGCGGAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK066736.1
ncRNA:21   CUCAAGGCGGUUUAUGAAGUG   1
  *||*|=||||||||||||||=
targets:1153   AAGCUUCGCCAAAUACUUCAU   1173

3.0 Oryza sativa Japonica Group cDNA clone:J013088O16, full insert sequence NA coding protein psRNATarget
XM_015772701.1
ncRNA:21   CUCAAGGCGGUUUAUGAAGUG   1
  *||*|=||||||||||||||=
targets:1161   AAGCUUCGCCAAAUACUUCAU   1181

3.0 PREDICTED: Oryza sativa Japonica Group probable galacturonosyltransferase 7 (LOC4332727), mRNA probable galacturonosyltransferase 7(LOC4332727) coding protein psRNATarget

Reference

1 PMID:16117853
"Molecular evolution of the rice miR395 gene family";
Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L;
Cell Res. 15:631-638(2005).