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BaseInfo

ncRNA ID	novel_zma_miR3489
Species	Zea mays
Class	miRNA
Genome position	Chr5:1615319-1615410 [+]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287162
Length	24
Mature sequence(if miRNA)	1 - AAACCGGAGAGGAUUGGAGAGGCU - 24
Stem-loop(if miRNA)	--        G          A         UUA           A   AAACCGGA AGGAUUGGAG GGCUAAAAU   UUUCUUAUUUA A   |||||||| |||||||||| |||||||||   |||||||||||   UUUGGCUU UCCUAACCUC CUGAUUUUA   AAAGAAUAAGU U GU        A          C         UAG           U
Stem-loop sequence	AAACCGGAGAGGAUUGGAGAGGCUAAAAUUUAUUUCUUAUUUAAAUUUGAAUAAGAAAGAUAUUUUAGUCCCUCCAAUCCUAUUCGGUUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664337.2	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAAA   1   |*=||||||||||||||||||||| targets:2085   AUUCUCUCCAAUCCUCUCCGGUUU   2108 Target Full Sequence	0.0	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget
XM_020543912.1	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAAA   1   ||||*||||||||||=|||||||| targets:4128   AGCCCCUCCAAUCCUUUCCGGUUU   4151 Target Full Sequence	1.5	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAAA   1   ||||*||=||||||*||||||||| targets:1114   AGCCCCUUCAAUCCCCUCCGGUUU   1137 Target Full Sequence	2.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget