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BaseInfo

ncRNA ID novel_zma_miR3482
Species Zea mays
Class miRNA
Genome position Chr4:76659153-76659287 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287162;SRR1997865
Length 24
Mature sequence(if miRNA) 1 - UCUCUGGUCAGGCGCGGACGGUAC - 24
Stem-loop(if miRNA) U    --GG     -       G  A G      --G -G  A    G       AC     -GU      G
 CUCU    UCAGG CGCGGAC GU C CGGCCU   G  GC GGAU GUCCGCG  CUGGC   GAGGCG C
 ||||    ||||| ||||||| || | ||||||   |  || |||| |||||||  |||||   ||||||
 GAGG    GGUCC GCGCCUG CA G GCCGGG   C  CG CCUG CAGGCGC  GACUG   UUUCGU G
C    ACGU     A       G  - -      ACA AG  -    G       -A     GUC      G
Stem-loop sequence UCUCUGGUCAGGCGCGGACGGUACGCGGCCUGGGGCAGGAUGGUCCGCGACCUGGCGUGAGGCGGCGGUGCUUUCUGGUCAGACGCGGACGGUCCGCGACACAGGGCCGGACGGUCCGCGACCUGGUGCAGGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   CAUGGCAGGCGCGGACUGGUCUCU   1
  |*||||||||||=|||||||||||
targets:24   GGACCGUCCGCGUCUGACCAGAGA   47

1.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget