ncRNA ID | novel_zma_miR3482 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:76659153-76659287 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287159;SRR2287162;SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUCUGGUCAGGCGCGGACGGUAC - 24 |
Stem-loop(if miRNA) |
U    --GG     -       G  A G      --G -G  A    G       AC     -GU      G  CUCU    UCAGG CGCGGAC GU C CGGCCU   G  GC GGAU GUCCGCG  CUGGC   GAGGCG C  ||||    ||||| ||||||| || | ||||||   |  || |||| |||||||  |||||   ||||||  GAGG    GGUCC GCGCCUG CA G GCCGGG   C  CG CCUG CAGGCGC  GACUG   UUUCGU G C    ACGU     A       G  - -      ACA AG  -    G       -A     GUC      G |
Stem-loop sequence | UCUCUGGUCAGGCGCGGACGGUACGCGGCCUGGGGCAGGAUGGUCCGCGACCUGGCGUGAGGCGGCGGUGCUUUCUGGUCAGACGCGGACGGUCCGCGACACAGGGCCGGACGGUCCGCGACCUGGUGCAGGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ096610.1 |
|
1.5 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget |