ncRNA ID | osa-miR395w |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:6606291-6606359 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 1 - GUGAAGUGUUUGGGGGAUUCUC - 22 |
Stem-loop(if miRNA) |
--         UUAAU          ----   A  AU   GAGUUCUCU     CAUUUCACAU    GGC CU  U   |||||||||     ||||||||||    ||| ||   CUUAGGGGG     GUGAAGUGUG    CCG GA  U CU         --UUU          UCAU   -  AU |
Stem-loop sequence | GAGUUCUCUUUAAUCAUUUCACAUGGCACUAUUUUAAGGCCUACUGUGUGAAGUGUUUGGGGGAUUCUC |
1 | PMID:16117853
"Molecular evolution of the rice miR395 gene family"; Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L; Cell Res. 15:631-638(2005). |
2 | PMID:20131478
"Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses"; Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK; Mol Genet Genomics. 282:463-474(2009). |