| ncRNA ID | osa-miR1440b |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr9:5980506-5980693 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 158 - UUUAGGAGAGUGGUAUUUGAG - 178 |
| Stem-loop(if miRNA) |
A C A CU CCAUUCAAACAAAAGU AAUGCCAGUGCUCAAAUACCACUCUCC AAAUUUUCAUU CCAAAUACCAUCCGGGCCCACAUGUCAGCCUCA UU G ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || UUACGGUUACGAGUUUAUGGUGAGAGG UUUAAAGGUAA GGUUUAUGGUGGGCCCGGGUGUACAGUCGGAGU GG A - A G -A UCGUGUCCCAGGGUGU |
| Stem-loop sequence | AAAUGCCAGUGCUCAAAUACCACUCUCCCAAAUUUUCAUUACCAAAUACCAUCCGGGCCCACAUGUCAGCCUCACUUUCCAUUCAAACAAAAGUGAUGUGGGACCCUGUGCUGGAUGAGGCUGACAUGUGGGCCCGGGUGGUAUUUGGGAAUGGAAAUUUAGGAGAGUGGUAUUUGAGCAUUGGCAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CT828227.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN015L21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK242353.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J080016G21, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice"; Liu Q; Funct Integr Genomics. 12:649-658(2012). |