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BaseInfo

ncRNA ID	novel_zma_miR3469
Species	Zea mays
Class	miRNA
Genome position	Chr4:77132034-77132100 [-]
Reference genome	RefGen_v4
Source	SRR2287031;SRR5451006
Length	24
Mature sequence(if miRNA)	1 - AGGAGUGGAAAAGAAUAGAGCGGU - 24
Stem-loop(if miRNA)	--U       -  -G    UC   U        GG    GUUCUAU CU  UUCA  CCU CAACUAAG  U    ||||||| ||  ||||  ||| ||||||||    CGAGAUA GA  AGGU  GGA GUUGGUUU  A UGG       A  AA    GA   -        GU
Stem-loop sequence	UGUUCUAUCUGUUCAUCCCUUCAACUAAGGGUAUGUUUGGUUGAGGAGUGGAAAAGAAUAGAGCGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654235.2	ncRNA:24   UGGCGAGAUAAGAAAAGGUGAGGA   1   =||*=|||||||||*||||||||| targets:4201   GCCAUUCUAUUCUUCUCCACUCCU   4224 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103632405 (LOC103632405), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT036810.1	ncRNA:24   UGGCGAGAUAAGAAAAGGUGAGGA   1   =||||*|**||||||||||||||| targets:108   GCCGCGCCCUUCUUUUCCACUCCU   131 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0139N19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001139340.1	ncRNA:24   UGGCGAGAUAAGAAAAGGUGAGGA   1   =||||*|**||||||||||||||| targets:108   GCCGCGCCCUUCUUUUCCACUCCU   131 Target Full Sequence	3.0	Zea mays Tryptophan RNA-binding attenuator protein-like (LOC100194302), mRNA	NA	coding protein	psRNATarget
XM_008665847.2	ncRNA:24   UGGCGAGAUAAGAAAAGGUGAGGA   1   =||||*|**||||||||||||||| targets:145   GCCGCGCCCUUCUUUUCCACUCCU   168 Target Full Sequence	3.0	PREDICTED: Zea mays Tryptophan RNA-binding attenuator protein-like (LOC100194302), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU973935.1	ncRNA:24   UGGCGAGAUAAGAAAAGGUGAGGA   1   =||||*|**||||||||||||||| targets:148   GCCGCGCCCUUCUUUUCCACUCCU   171 Target Full Sequence	3.0	Zea mays clone 424609 mRNA sequence	NA	coding protein	psRNATarget
AY104540.2	ncRNA:24   UGGCGAGAUAAGAAAAGGUGAGGA   1   =||||*|**||||||||||||||| targets:135   GCCGCGCCCUUCUUUUCCACUCCU   158 Target Full Sequence	3.0	Zea mays PCO106157 mRNA sequence	NA	coding protein	psRNATarget