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BaseInfo

ncRNA ID	novel_zma_miR3465
Species	Zea mays
Class	miRNA
Genome position	Chr4:149415893-149416035 [-]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287159;SRR2287162;SRR2287163;SRR2287164;SRR4237220;SRR4237224;SRR4237225;SRR4237226;SRR4237227;SRR5099742;SRR5100248
Length	21
Mature sequence(if miRNA)	1 - UUUGGCAAUUUAAGGACUAAA - 21
Stem-loop(if miRNA)	--UU    C       A       AUA         UUUA        -           UAU   AG ACU     GUCC UAAAUUG CAGAUAC   AACUAAAAU    UUUUAGUU AUGUAUUUGGC   UUA  G   A     |||| ||||||| |||||||   |||||||||    |||||||| |||||||||||   |||  |   A     CAGG AUUUAAC GUUUAUG   UUGAUUUUA    AAAAUCAA UAUAUAAACUG   AAU  C   A AAAU    A       G       -CC         UUUC        A           UUU   AA AUA
Stem-loop sequence	UUGUCCCUAAAUUGACAGAUACAUAAACUAAAAUUUUAUUUUAGUUAUGUAUUUGGCUAUUUAAGGACUAAAAUACAAUAAUUUGUCAAAUAUAUAAACUAAAACUUUAUUUUAGUUCCGUAUUUGGCAAUUUAAGGACUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545045.1	ncRNA:21   AAAUCAGGAAUUUAACGGUUU   1   ||||||||*|||||||||||| targets:2172   UUUAGUCCCUAAAUUGCCAAA   2192 Target Full Sequence	1.5	PREDICTED: Zea mays CAB2 (LOC100281582), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT055601.1	ncRNA:21   AAAUCAGGAAUUUAACGGUUU   1   |||||||=*|||||||||||| targets:835   UUUAGUCUAUAAAUUGCCAAA   855 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0063A22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153051.1	ncRNA:21   AAAUCAGGAAUUUAACGGUUU   1   |||||||=*|||||||||||| targets:835   UUUAGUCUAUAAAUUGCCAAA   855 Target Full Sequence	2.5	Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100280114), mRNA	NA	coding protein	psRNATarget
DQ245862.1	ncRNA:21   AAAUCAGGAAUUUAACGGUUU   1   |||||||=*|||||||||||| targets:1083   UUUAGUCUCUAAAUUGCCAAA   1103 Target Full Sequence	2.5	Zea mays clone 21092 mRNA sequence	NA	coding protein	psRNATarget
XM_008680551.2	ncRNA:21   AAAUCAGGAAUUUAACGGUUU   1   |||||||=*|||||||||||| targets:859   UUUAGUCUAUAAAUUGCCAAA   879 Target Full Sequence	2.5	PREDICTED: Zea mays Plant-specific domain TIGR01589 family protein (pco120805), transcript variant X1, mRNA	NA	coding protein	psRNATarget