ncRNA ID | novel_zma_miR3446 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:76362288-76362415 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAGAUCUAGUGUGAUAGAGCCACU - 24 |
Stem-loop(if miRNA) |
--CA      G        ---   C      --------------------------------CCA   UCAAAUUCCACA     GAUCUA UGUGAUAG   AGC ACUUAA                                   GGA            A     |||||| ||||||||   ||| ||||||                                   |||            U     CUAGAU ACAUUAUU   UCG UGAAUU                                   GAG            C GAGG      -        AAG   -      AAACUCCAAGGACAAAAUAACAUAAAGAAGACACU   UGGAAGCUCACU |
Stem-loop sequence | CAGAUCUAGUGUGAUAGAGCCACUUAACCAGGAUCAAAUUCCACAAUCUCACUCGAAGGUGAGUCACAGAAGAAAUACAAUAAAACAGGAACCUCAAAUUAAGUGCUGAAUUAUUACAUAGAUCGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU948674.1 |
|
1.5 | Zea mays clone 381761 mRNA sequence | NA | coding protein | psRNATarget |