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BaseInfo

ncRNA ID osa-miR2055
Species Oryza sativa
Class miRNA
Genome position Chr9:431432-431531 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 7 - UUUCCUUGGGAAGGUGGUUUC - 27
Stem-loop(if miRNA)       U    G    AG          -----CA   ACAUUGACACGCAA
AGAAGA GGAG CACC  CCCAAGGAAA       CAG              U
|||||| |||| ||||  ||||||||||       |||
UCUUCU CUUU GUGG  GGGUUCCUUU       UGC              U
      -    G    AA          UUCAUCC   GUUAGAAGAGGAAC
Stem-loop sequence AGAAGAUGGAGGCACCAGCCCAAGGAAACACAGACAUUGACACGCAAUUCAAGGAGAAGAUUGCGUCCUACUUUUUCCUUGGGAAGGUGGUUUCUCUUCU

Reference

1 PMID:19055717
"Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice";
Lacombe S, Nagasaki H, Santi C, Duval D, Piegu B, Bangratz M, Breitler JC, Guiderdoni E, Brugidou C, Hirsch J, Cao X, Brice C, Panaud O, Karlowski WM, Sato Y, Echeverria M;
BMC Plant Biol. 8:123(2008).