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BaseInfo

ncRNA ID ath-miRf10042-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUACUCGACCUCUGGGUCGAGUGGU - NA
Stem-loop(if miRNA)   G      UCCU          UG U        ---      UU A
GU GUGAUG    CUACUCGACC  G GGUCGAGU   GGUUUC  G G
|| ||||||    ||||||||||  | ||||||||   ||||||  |
UA UACUGU    GGUGAGCUGG  C CCAGCUCA   UCGAAG  C A
  G      --UU          GU U        UCC      UU U
Stem-loop sequence GUGGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUUUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:25   UGGUGAGCUGGGUCUCCAGCUCAUC   1
  |||||||||||||||||||||||||
targets:762   ACCACUCGACCCAGAGGUCGAGUAG   786

0.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:25   UGGUGAGCUGGGUCUCCAGCUCAUC   1
  |||||||||||**||||||||||||
targets:1525   ACCACUCGACCACGAGGUCGAGUAG   1549

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:25   UGGUGAGCUGGGUCUCCAGCUCAUC   1
  *=|||||*|||=||||||||||||*
targets:925   CUCACUCUACCUAGAGGUCGAGUAU   949

3.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget