ncRNA ID | novel_zma_miR3428 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:72598608-72598699 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089715;SRR4237227 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCCGAACGAGAUUUGAGGUU - 21 |
Stem-loop(if miRNA) |
--A       G   -          A       -   A A      UA    CUCAAAU CUC UUCGGAAUUG AGGGGAU GGG G GGAAAU  G    ||||||| ||| |||||||||| ||||||| ||| | ||||||    GAGUUUA GAG AAGCCUUAAC UCUCCUA CUC C UCUUUA  U UUG       -   C          C       A   - A      CU |
Stem-loop sequence | ACUCAAAUGCUCUUCGGAAUUGAAGGGGAUGGGAGAGGAAAUUAGUUCAUUUCUACCUCAAUCCUCUCCAAUUCCGAACGAGAUUUGAGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ111591.1 |
|
0.0 | TSA: Zea mays contig47252, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT086707.2 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFb0136H07 mRNA, complete cds | NA | coding protein | psRNATarget |