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BaseInfo

ncRNA ID novel_zma_miR3420
Species Zea mays
Class miRNA
Genome position Chr1:156045052-156045106 [-]
Reference genome RefGen_v4
Source SRR2089715;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - AAUUUAUCGGGCACUCGGCAAAAC - 24
Stem-loop(if miRNA) --                  CU    C
  UUUGUCGAGUGCCCGAUG  UUGU G
  ||||||||||||||||||  |||| A
  AAACGGCUCACGGGCUAU  AACA C
CA                  UU    A
Stem-loop sequence UUUGUCGAGUGCCCGAUGCUUUGUCGACAACAAUUUAUCGGGCACUCGGCAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008657060.2
ncRNA:24   CAAAACGGCUCACGGGCUAUUUAA   1
  ||||||||||*||=||||||||||
targets:1924   GUUUUGCCGAAUGUCCGAUAAAUU   1947

2.5 PREDICTED: Zea mays uncharacterized LOC100383497 (LOC100383497), transcript variant X1, mRNA NA coding protein psRNATarget