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BaseInfo

ncRNA ID novel_zma_miR3398
Species Zea mays
Class miRNA
Genome position Chr8:2000805-2000849 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 22
Mature sequence(if miRNA) 1 - GACUUCGGACGCAACACGCUGA - 22
Stem-loop(if miRNA) --   --U    CUG        G
  AGC   UUGU   CCGAAGUC A
  |||   ||||   ||||||||
  UCG   AACG   GGCUUCAG G
AG   CAC    -CA        A
Stem-loop sequence AGCUUUGUCUGCCGAAGUCGAGAGACUUCGGACGCAACACGCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943103.1
ncRNA:22   AGUCGCACAACGCAGGCUUCAG   1
  *||||||*|||*||||||||||
targets:339   ACAGCGUCUUGAGUCCGAAGUC   360

2.5 Zea mays clone 1560781 mRNA sequence NA coding protein psRNATarget