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BaseInfo

ncRNA ID novel_zma_miR3394
Species Zea mays
Class miRNA
Genome position Chr8:9576330-9576486 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - AGGAACUGCAUUCGCAUGGUAUGC - 24
Stem-loop(if miRNA) --     ---    UU   GA        --G     CAA     G  CACGC        -AU     -AGUUC      CAAUU
  AUACC   CGAA  UGU  AGUUUUUG   GUGAU   GGAAA AG     GCGAGCAU   AUGCC      UUAGCA     A
  |||||   ||||  |||  ||||||||   |||||   ||||| ||     ||||||||   |||||      ||||||     G
  UAUGG   GCUU  ACG  UCAAGGAC   UACUA   CUUUU UC     UGCUUGUG   UGCGG      AGUCGU     G
CG     UAC    --   --        AAU     UUA     A  -----        CCU     AGACAC      UAAGA
Stem-loop sequence AUACCCGAAUUUGUGAAGUUUUUGGGUGAUCAAGGAAAGAGCACGCGCGAGCAUAUAUGCCAGUUCUUAGCACAAUUAGGAGAAUUGCUGACACAGAGGCGUUCCGUGUUCGUCUAUUUUCAUUAUCAUUAACAGGAACUGCAUUCGCAUGGUAUGC