ncRNA ID | novel_zma_miR3389 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:33806132-33806346 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCCCUCUGUUCAUAAAUAUAUGAC - 24 |
Stem-loop(if miRNA) |
--UC   C                               AAAAA    C        C  U       A     UAAUGAGUU     UUUUUGUGAUUUGUUUUAACACUU     CCU UGUUCAUAAAUAUAUGACACCGUUGGCUUUU     AAAA UUUGACCA UU UCUUAUU CAAAA         AUUAU                        A     ||| |||||||||||||||||||||||||||||||     |||| |||||||| || ||||||| |||||         |||||                        A     GGA AUAAGUGUUUAUAUACUGUGGCAACUGAAAA     UUUU AAACUGGU AA AGAAUAA GUUUU         ACAUU                        G UCAU   A                               -AAGC    A        A  C       -     --------U     UUAAAGUUCAGUUGGUGUUUGAUG |
Stem-loop sequence | UCCCUCUGUUCAUAAAUAUAUGACACCGUUGGCUUUUAAAAAAAAACUUUGACCACUUUUCUUAUUACAAAAUAAUGAGUUAUUAUUUUUUGUGAUUUGUUUUAACACUUAAGGUAGUUUGUGGUUGACUUGAAAUUUUACAUUUUUGAAUAAGACAAAUGGUCAAAAUUUUCGAAAAAAGUCAACGGUGUCAUAUAUUUGUGAAUAAAGGUACU |