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BaseInfo

ncRNA ID novel_zma_miR3389
Species Zea mays
Class miRNA
Genome position Chr8:33806132-33806346 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - UCCCUCUGUUCAUAAAUAUAUGAC - 24
Stem-loop(if miRNA) --UC   C                               AAAAA    C        C  U       A     UAAUGAGUU     UUUUUGUGAUUUGUUUUAACACUU
    CCU UGUUCAUAAAUAUAUGACACCGUUGGCUUUU     AAAA UUUGACCA UU UCUUAUU CAAAA         AUUAU                        A
    ||| |||||||||||||||||||||||||||||||     |||| |||||||| || ||||||| |||||         |||||                        A
    GGA AUAAGUGUUUAUAUACUGUGGCAACUGAAAA     UUUU AAACUGGU AA AGAAUAA GUUUU         ACAUU                        G
UCAU   A                               -AAGC    A        A  C       -     --------U     UUAAAGUUCAGUUGGUGUUUGAUG
Stem-loop sequence UCCCUCUGUUCAUAAAUAUAUGACACCGUUGGCUUUUAAAAAAAAACUUUGACCACUUUUCUUAUUACAAAAUAAUGAGUUAUUAUUUUUUGUGAUUUGUUUUAACACUUAAGGUAGUUUGUGGUUGACUUGAAAUUUUACAUUUUUGAAUAAGACAAAUGGUCAAAAUUUUCGAAAAAAGUCAACGGUGUCAUAUAUUUGUGAAUAAAGGUACU