ncRNA ID | novel_zma_miR3387 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:117405200-117405381 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715;SRR5451006 |
Length | 24 |
Mature sequence(if miRNA) | 159 - AUAGGGACCGGAAUGUGCAUGUUG - 182 |
Stem-loop(if miRNA) |
--         A              U G                      C                       A         C  GUC   ACGUGCACA UUCGGUCCUUAUAU U UAUGGUUAUGUCAUCUGGGUCU UAAACUUGUUUUUGGUGUCAUCA AGGUCCGAA AG   U   ||||||||| |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||   UGUACGUGU AGGCCAGGGAUAUG A AUACCAAUACAGUAGACCCAGG GUUUGAACAAAAACCACAGUAGU UCCAGGUUU UC   C GU         A              U G                      C                       G         A  AAA |
Stem-loop sequence | ACGUGCACAAUUCGGUCCUUAUAUUUGUAUGGUUAUGUCAUCUGGGUCUCUAAACUUGUUUUUGGUGUCAUCAAAGGUCCGAACAGGUCUCAAACUAUUUGGACCUGUGAUGACACCAAAAACAAGUUUGCGGACCCAGAUGACAUAACCAUAGAUGUAUAGGGACCGGAAUGUGCAUGUUG |