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BaseInfo

ncRNA ID novel_zma_miR3384
Species Zea mays
Class miRNA
Genome position Chr8:37487560-37487671 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 25
Mature sequence(if miRNA) 88 - UGCUGAGUGUUGUAUUUGUGACACU - 112
Stem-loop(if miRNA) --           G     G                 -CC              AA
  UGCUGAGUGUU UAUUU UGACACUCGGCAAAGAG   CUUUGCCGAGUGUC  A
  ||||||||||| ||||| |||||||||||||||||   ||||||||||||||  A
  ACGGCUCACAA AUAAA ACUGUGAGCCGUUUCUC   GAAACGGCUCACAG  A
AA           A     A                 AAA              AA
Stem-loop sequence UGCUGAGUGUUGUAUUUGUGACACUCGGCAAAGAGCCCUUUGCCGAGUGUCAAAAAAAGACACUCGGCAAAGAAACUCUUUGCCGAGUGUCAAAAAUAAAACACUCGGCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067071.1
ncRNA:25   UCACAGUGUUUAUGUUGUGAGUCGU   1
  |****=|||||||*|||||||||||
targets:43   ACACCUACAAAUAAAACACUCAGCA   67

1.5 Zea mays full-length cDNA clone ZM_BFb0175I04 mRNA, complete cds NA coding protein psRNATarget