ncRNA ID | novel_zma_miR3382 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:214798636-214798707 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715;SRR2089701 |
Length | 24 |
Mature sequence(if miRNA) | 49 - AAAUAAACUUAUUUUCGGCGGCCA - 72 |
Stem-loop(if miRNA) |
--      A         CAG        A    AUU   GCCGCC AAAAUAAGU   UAUUUUCG CGGC   G   |||||| |||||||||   |||||||| ||||   CGGCGG UUUUAUUCA   AUAAAAGC GCCG   C AC      C         --A        C    ACU |
Stem-loop sequence | GCCGCCAAAAAUAAGUCAGUAUUUUCGACGGCAUUGCUCAGCCGCCGAAAAUAAACUUAUUUUCGGCGGCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020546193.1 |
|
1.5 | PREDICTED: Zea mays spidroin-1-like (LOC103636899), mRNA | NA | coding protein | psRNATarget |