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BaseInfo

ncRNA ID novel_zma_miR3382
Species Zea mays
Class miRNA
Genome position Chr1:214798636-214798707 [+]
Reference genome RefGen_v4
Source SRR2089715;SRR2089701
Length 24
Mature sequence(if miRNA) 49 - AAAUAAACUUAUUUUCGGCGGCCA - 72
Stem-loop(if miRNA) --      A         CAG        A    AUU
  GCCGCC AAAAUAAGU   UAUUUUCG CGGC   G
  |||||| |||||||||   |||||||| ||||
  CGGCGG UUUUAUUCA   AUAAAAGC GCCG   C
AC      C         --A        C    ACU
Stem-loop sequence GCCGCCAAAAAUAAGUCAGUAUUUUCGACGGCAUUGCUCAGCCGCCGAAAAUAAACUUAUUUUCGGCGGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546193.1
ncRNA:24   ACCGGCGGCUUUUAUUCAAAUAAA   1
  |||||||||||||||||*||||||
targets:521   UGGCCGCCGAAAAUAAGGUUAUUU   544

1.5 PREDICTED: Zea mays spidroin-1-like (LOC103636899), mRNA NA coding protein psRNATarget