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BaseInfo

ncRNA ID novel_zma_miR3380
Species Zea mays
Class miRNA
Genome position Chr9:48773074-48773129 [+]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 1 - AAUGUUAUUUACACUGGCGGGCUG - 24
Stem-loop(if miRNA) --         UA         ---G  G
  AAUGUUAUU  CACUGGCGG    CU C
  |||||||||  |||||||||    || U
  UUGUAAUAA  GUGACCGCC    GA A
CU         UA         AAAA  A
Stem-loop sequence AAUGUUAUUUACACUGGCGGGCUGCUAAAGAAAACCGCCAGUGAUAAUAAUGUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ107356.1
ncRNA:24   GUCGGGCGGUCACAUUUAUUGUAA   1
  ||--|=|=|||||||||||||||*
targets:73   CA--CUGUCAGUGUAAAUAACAUC   94

3.0 TSA: Zea mays contig43014, mRNA sequence NA coding protein psRNATarget