ncRNA ID | novel_zma_miR3379 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:48772941-48773040 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUUAUUUACACUGGCGGGCUG - 24 |
Stem-loop(if miRNA) |
--     U    A   U           A    AA      A   AU      AAUGU AUUU CAC GGCGGGCUGCU AAGA  ACCGCC GUG  AAUA   ||||| |||| ||| ||||||||||| ||||  |||||| |||  |||A   UUGUA UAAA GUG CCGCCCGACGA UUCU  UGGCGG CAC  UUGU CU     C    A   U           A    -G      A   CU    |
Stem-loop sequence | AAUGUUAUUUACACUGGCGGGCUGCUAAAGAAAACCGCCAGUGAUAAUAAUGUUUCCACAGGCGGUGUCUUAAGCAGCCCGCCUGUGAAAAUCAUGUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ107356.1 |
|
3.0 | TSA: Zea mays contig43014, mRNA sequence | NA | coding protein | psRNATarget |