ncRNA ID | novel_zma_miR3361 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:17255567-17255694 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715 |
Length | 24 |
Mature sequence(if miRNA) | 105 - GUUUUUAAUUUAAGUUCGUGGGCC - 128 |
Stem-loop(if miRNA) |
--U     GG     -CG                           ---         U    CCUG    UCAUG  UUUGA   AAGAACGUGGGUACCCACGUUUUUAAU   UUAAGUUCG GCGG    A    |||||  |||||   |||||||||||||||||||||||||||   ||||||||| ||||    C    GGUGC  GAAUU   UUUUUGCACCCAUGGGUGCAAAGAUUA   AAUUCAAGC UGCC    U CCG     UU     UAA                           UGG         -    AAAG |
Stem-loop sequence | UUCAUGGGUUUGACGAAGAACGUGGGUACCCACGUUUUUAAUUUAAGUUCGUGCGGCCUGACUGAAACCGUCGAACUUAAGGUAUUAGAAACGUGGGUACCCACGUUUUUAAUUUAAGUUCGUGGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ107231.1 |
|
3.0 | TSA: Zea mays contig42889, mRNA sequence | NA | coding protein | psRNATarget |