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BaseInfo

ncRNA ID novel_zma_miR3360
Species Zea mays
Class miRNA
Genome position Chr8:75234495-75234651 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 23
Mature sequence(if miRNA) 135 - UUUCUAGGGACUAAUGUUUAGUU - 157
Stem-loop(if miRNA) --                          A           A       UCCA      UC                 C
  UUUCUAGGGACUAAUGUUUAGUUCCU CAUUUUAUUCC UUUUAGU    AAAUUG  AAAUAUAGAAACUAAAA U
  |||||||||||||||||||||||||| ||||||||||| |||||||    ||||||  ||||||||||||||||| U
  AAAGAUCCCUGAUUAUAAAUCAGGGA GUGAAAUAAGG AAAAUCA    UUUAAC  UUUAUAUCUUUGAUUUU U
CC                          A           A       UAUA      GA                 A
Stem-loop sequence UUUCUAGGGACUAAUGUUUAGUUCCUACAUUUUAUUCCAUUUUAGUUCCAAAAUUGUCAAAUAUAGAAACUAAAACUUUAUUUUAGUUUCUAUAUUUAGCAAUUUAUAUACUAAAAAGGAAUAAAGUGAAGGGACUAAAUAUUAGUCCCUAGAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008674147.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:17   GACUAAACAUUAGUCCCUAGAAA   39

0.0 PREDICTED: Zea mays uncharacterized LOC100272682 (TIDP2766), transcript variant X8, mRNA NA coding protein psRNATarget
XM_020546554.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:28   GACUAAACAUUAGUCCCUAGAAA   50

0.0 PREDICTED: Zea mays uncharacterized LOC109943471 (LOC109943471), mRNA NA coding protein psRNATarget
BT083492.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:789   GACUAAACAUUAGUCCCUAGAAA   811

0.0 Zea mays full-length cDNA clone ZM_BFb0003B18 mRNA, complete cds NA coding protein psRNATarget
NM_001156492.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:1304   GACUAAACAUUAGUCCCUAGAAA   1326

0.0 Zea mays protein COQ10 A (LOC100283591), mRNA NA coding protein psRNATarget
EU965238.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:1304   GACUAAACAUUAGUCCCUAGAAA   1326

0.0 Zea mays clone 284715 protein COQ10 A mRNA, complete cds NA coding protein psRNATarget
LQ235125.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:144   GACUAAACAUUAGUCCCUAGAAA   166

0.0 Sequence 1120 from Patent EP2985353 NA coding protein psRNATarget
JB163456.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:144   GACUAAACAUUAGUCCCUAGAAA   166

0.0 Sequence 1120 from Patent EP2559767 NA coding protein psRNATarget
HI402995.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:144   GACUAAACAUUAGUCCCUAGAAA   166

0.0 Sequence 1120 from Patent EP2074227 NA coding protein psRNATarget
HI403044.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:142   GACUAAACAUUAGUCCCUAGAAA   164

0.0 Sequence 1169 from Patent EP2074227 NA coding protein psRNATarget
LQ235182.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:142   GACUAAACAUUAGUCCCUAGAAA   164

0.0 Sequence 1177 from Patent EP2985353 NA coding protein psRNATarget
LQ235174.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:142   GACUAAACAUUAGUCCCUAGAAA   164

0.0 Sequence 1169 from Patent EP2985353 NA coding protein psRNATarget
JB163505.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:142   GACUAAACAUUAGUCCCUAGAAA   164

0.0 Sequence 1169 from Patent EP2559767 NA coding protein psRNATarget
HI403052.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:142   GACUAAACAUUAGUCCCUAGAAA   164

0.0 Sequence 1177 from Patent EP2074227 NA coding protein psRNATarget
JB163513.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:142   GACUAAACAUUAGUCCCUAGAAA   164

0.0 Sequence 1177 from Patent EP2559767 NA coding protein psRNATarget
HI402994.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:141   GACUAAACAUUAGUCCCUAGAAA   163

0.0 Sequence 1119 from Patent EP2074227 NA coding protein psRNATarget
JB163455.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:141   GACUAAACAUUAGUCCCUAGAAA   163

0.0 Sequence 1119 from Patent EP2559767 NA coding protein psRNATarget
LQ235124.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||||||
targets:141   GACUAAACAUUAGUCCCUAGAAA   163

0.0 Sequence 1119 from Patent EP2985353 NA coding protein psRNATarget
XM_020543841.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||||||||||
targets:1059   GACUAAAUAUUAGUCCCUAGAAA   1081

1.0 PREDICTED: Zea mays lo1 pI allergen homolog 1 (lop1), transcript variant X1, mRNA NA coding protein psRNATarget
JB163556.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||=|||||||
targets:127   GACUAAACAUUAGUCUCUAGAAA   149

1.5 Sequence 1220 from Patent EP2559767 NA coding protein psRNATarget
LQ235225.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||=|||||||
targets:127   GACUAAACAUUAGUCUCUAGAAA   149

1.5 Sequence 1220 from Patent EP2985353 NA coding protein psRNATarget
HI403095.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||=|||||||
targets:127   GACUAAACAUUAGUCUCUAGAAA   149

1.5 Sequence 1220 from Patent EP2074227 NA coding protein psRNATarget
EZ095413.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  |||||||=||||||=||||||||
targets:55   AACUAAAUAUUAGUUCCUAGAAA   77

2.5 TSA: Zea mays contig31066, mRNA sequence NA coding protein psRNATarget
XM_020548275.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:2154   GACUAAAAAUUAGUCCCUAGAAA   2176

1.0 PREDICTED: Zea mays putative pentatricopeptide repeat-containing protein At1g09680 (LOC103648586), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001152323.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:2074   GACUAAAAAUUAGUCCCUAGAAA   2096

1.0 Zea mays uncharacterized LOC100279302 (LOC100279302), mRNA NA coding protein psRNATarget
BT053999.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:2074   GACUAAAAAUUAGUCCCUAGAAA   2096

1.0 Zea mays full-length cDNA clone ZM_BFc0109O10 mRNA, complete cds NA coding protein psRNATarget
XM_008656457.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:1750   GACUAAACAUUAGUCCCUACAAA   1772

1.5 PREDICTED: Zea mays programmed cell death protein 2 (LOC103634523), transcript variant X5, mRNA NA coding protein psRNATarget
NM_001151347.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:40   GACUAAACAUUAGUCCCUAUAAA   62

1.5 Zea mays hypothetical protein (LOC100277899), mRNA NA coding protein psRNATarget
XM_008676281.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:32   GACUAAACAUUAGUCCCUACAAA   54

1.5 PREDICTED: Zea mays U-box domain-containing protein 14 (LOC103650716), mRNA NA coding protein psRNATarget
XM_008674295.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:10   GACUAAACAUUAGUCCCUAAAAA   32

1.5 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100274149), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008674294.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:10   GACUAAACAUUAGUCCCUAAAAA   32

1.5 PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100274149), transcript variant X1, mRNA NA coding protein psRNATarget
EU967664.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:1238   GACUAAAAAUUAGUCCCUAGAAA   1260

1.0 Zea mays clone 305169 NADH-cytochrome b5 reductase mRNA, complete cds NA coding protein psRNATarget
NM_001112602.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:1238   GACUAAAAAUUAGUCCCUAGAAA   1260

1.0 Zea mays ferric-chelate reductase (NADH)2 (fcr2), mRNA NA coding protein psRNATarget
BT065747.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:904   GACUAAAAAUUAGUCCCUAGAAA   926

1.0 Zea mays full-length cDNA clone ZM_BFc0062G24 mRNA, complete cds NA coding protein psRNATarget
XM_020542840.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:1112   GACUAAACAUUAGUCCCUACAAA   1134

1.5 PREDICTED: Zea mays hypothetical protein (LOC103636172), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553397.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:692   GACUAAACAUUAGUCCCUACAAA   714

1.5 PREDICTED: Zea mays SANT/MYB protein (LOC100284980), transcript variant X1, mRNA NA coding protein psRNATarget
EZ060524.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:184   GACUAAACAUUAGUCCCUAUAAA   206

1.5 TSA: Zea mays contig61646, mRNA sequence NA coding protein psRNATarget
EZ114258.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:5   GACUAAACAUUAGUCCCUAAAAA   27

1.5 TSA: Zea mays contig49919, mRNA sequence NA coding protein psRNATarget
LQ235180.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:126   GACUAAAAAUUAGUCCCUAGAAA   148

1.0 Sequence 1175 from Patent EP2985353 NA coding protein psRNATarget
HI403050.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:126   GACUAAAAAUUAGUCCCUAGAAA   148

1.0 Sequence 1175 from Patent EP2074227 NA coding protein psRNATarget
JB163511.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||||||
targets:126   GACUAAAAAUUAGUCCCUAGAAA   148

1.0 Sequence 1175 from Patent EP2559767 NA coding protein psRNATarget
EZ103355.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||||||||||||||*|||
targets:94   GACUAAACAUUAGUCCCUAAAAA   116

1.5 TSA: Zea mays contig39012, mRNA sequence NA coding protein psRNATarget
XM_020547858.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:1681   GACUAAAUAUUAGUCACUAGAAA   1703

2.5 PREDICTED: Zea mays uncharacterized LOC100382535 (LOC100382535), transcript variant X3, mRNA NA coding protein psRNATarget
NM_001153051.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||=|||||||
targets:927   GACUAAAAAUUAGUCUCUAGAAA   949

2.5 Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100280114), mRNA NA coding protein psRNATarget
BT055601.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||=|||||||
targets:927   GACUAAAAAUUAGUCUCUAGAAA   949

2.5 Zea mays full-length cDNA clone ZM_BFc0063A22 mRNA, complete cds NA coding protein psRNATarget
JB163501.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:144   GACUAAAUAUUAGUCACUAGAAA   166

2.5 Sequence 1165 from Patent EP2559767 NA coding protein psRNATarget
JB163514.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:144   GACUAAAUAUUAGUCACUAGAAA   166

2.5 Sequence 1178 from Patent EP2559767 NA coding protein psRNATarget
LQ235183.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:144   GACUAAAUAUUAGUCACUAGAAA   166

2.5 Sequence 1178 from Patent EP2985353 NA coding protein psRNATarget
HI403040.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:144   GACUAAAUAUUAGUCACUAGAAA   166

2.5 Sequence 1165 from Patent EP2074227 NA coding protein psRNATarget
HI403053.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:144   GACUAAAUAUUAGUCACUAGAAA   166

2.5 Sequence 1178 from Patent EP2074227 NA coding protein psRNATarget
LQ235170.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||*|||||||
targets:144   GACUAAAUAUUAGUCACUAGAAA   166

2.5 Sequence 1165 from Patent EP2985353 NA coding protein psRNATarget
JB163522.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||||||*|||
targets:141   GACUAAAUAUUAGUCCCUAAAAA   163

2.5 Sequence 1186 from Patent EP2559767 NA coding protein psRNATarget
HI403061.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||||||*|||
targets:141   GACUAAAUAUUAGUCCCUAAAAA   163

2.5 Sequence 1186 from Patent EP2074227 NA coding protein psRNATarget
LQ235191.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||=|||||||||||*|||
targets:141   GACUAAAUAUUAGUCCCUAAAAA   163

2.5 Sequence 1186 from Patent EP2985353 NA coding protein psRNATarget
LQ235177.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =|||||||*|||||||=||||||
targets:10   GACUAAACUUUAGUCCUUAGAAA   32

2.5 Sequence 1172 from Patent EP2985353 NA coding protein psRNATarget
JB163508.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =|||||||*|||||||=||||||
targets:10   GACUAAACUUUAGUCCUUAGAAA   32

2.5 Sequence 1172 from Patent EP2559767 NA coding protein psRNATarget
HI403047.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =|||||||*|||||||=||||||
targets:10   GACUAAACUUUAGUCCUUAGAAA   32

2.5 Sequence 1172 from Patent EP2074227 NA coding protein psRNATarget
BT018349.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||||*
targets:701   GACUAAAAAUUAGUCCCUAGAAU   723

2.0 Zea mays clone EL01T0403E10.c mRNA sequence NA coding protein psRNATarget
JB163516.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  |||||||*|||||||||||*|||
targets:142   AACUAAAAAUUAGUCCCUACAAA   164

2.5 Sequence 1180 from Patent EP2559767 NA coding protein psRNATarget
LQ235185.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  |||||||*|||||||||||*|||
targets:142   AACUAAAAAUUAGUCCCUACAAA   164

2.5 Sequence 1180 from Patent EP2985353 NA coding protein psRNATarget
HI403055.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  |||||||*|||||||||||*|||
targets:142   AACUAAAAAUUAGUCCCUACAAA   164

2.5 Sequence 1180 from Patent EP2074227 NA coding protein psRNATarget
XM_020547054.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:423   GACUAAAAAUUAGUCCCUAAAAA   445

2.5 PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020547055.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:421   GACUAAAAAUUAGUCCCUAAAAA   443

2.5 PREDICTED: Zea mays myosin-6 (LOC103644344), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546793.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||*||||||||
targets:3707   GACUAAAAAUUAGUGCCUAGAAA   3729

2.5 PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546794.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||*||||||||
targets:3670   GACUAAAAAUUAGUGCCUAGAAA   3692

2.5 PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546795.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||*||||||||
targets:3620   GACUAAAAAUUAGUGCCUAGAAA   3642

2.5 PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546796.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||*||||||||
targets:3545   GACUAAAAAUUAGUGCCUAGAAA   3567

2.5 PREDICTED: Zea mays F-box/LRR-repeat protein 15-like (LOC103643599), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008683103.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:2974   GACUAAAAAUUAGUCCCUAUAAA   2996

2.5 PREDICTED: Zea mays Pre-mRNA-splicing factor 3 (LOC100217215), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020552869.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:1772   GACUAAAAAUUAGUCCCUAGUAA   1794

2.5 PREDICTED: Zea mays NADPH:adrenodoxin oxidoreductase, mitochondrial-like (LOC109946102), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020550132.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:133   GACUAAAAAUUAGUCCCUAGUAA   155

2.5 PREDICTED: Zea mays putrescine hydroxycinnamoyltransferase 1-like (LOC103649816), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549268.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:1255   GACUAAAAAUUAGUCCCUAGUAA   1277

2.5 PREDICTED: Zea mays ethylene-responsive transcription factor ERF039 (LOC100283619), mRNA NA coding protein psRNATarget
XM_008680551.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||*|||||||
targets:951   GACUAAAAAUUAGUCACUAGAAA   973

2.5 PREDICTED: Zea mays Plant-specific domain TIGR01589 family protein (pco120805), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001143572.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:975   GACUAAAAAUUAGUCCCUAUAAA   997

2.5 Zea mays Pre-mRNA-splicing factor 3 (LOC100217215), mRNA NA coding protein psRNATarget
BT038140.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:975   GACUAAAAAUUAGUCCCUAUAAA   997

2.5 Zea mays full-length cDNA clone ZM_BFb0213P07 mRNA, complete cds NA coding protein psRNATarget
EU945607.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:256   GACUAAAAAUUAGUCCCUAGUAA   278

2.5 Zea mays clone 279279 mRNA sequence NA coding protein psRNATarget
EU941753.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||*||||||||
targets:146   GACUAAAAAUUAGUGCCUAGAAA   168

2.5 Zea mays clone 1469712 mRNA sequence NA coding protein psRNATarget
LQ238744.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:88   GACUAAAAAUUAGUCCCUAGUAA   110

2.5 Sequence 4739 from Patent EP2985353 NA coding protein psRNATarget
JB167075.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:88   GACUAAAAAUUAGUCCCUAGUAA   110

2.5 Sequence 4739 from Patent EP2559767 NA coding protein psRNATarget
HI406614.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*||||||||||||*||
targets:88   GACUAAAAAUUAGUCCCUAGUAA   110

2.5 Sequence 4739 from Patent EP2074227 NA coding protein psRNATarget
JB163502.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:142   GACUAAAAAUUAGUCCCUACAAA   164

2.5 Sequence 1166 from Patent EP2559767 NA coding protein psRNATarget
LQ235171.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:142   GACUAAAAAUUAGUCCCUACAAA   164

2.5 Sequence 1166 from Patent EP2985353 NA coding protein psRNATarget
HI403041.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:142   GACUAAAAAUUAGUCCCUACAAA   164

2.5 Sequence 1166 from Patent EP2074227 NA coding protein psRNATarget
EZ077632.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  =||||||*|||||||||||*|||
targets:25   GACUAAAAAUUAGUCCCUACAAA   47

2.5 TSA: Zea mays contig13271, mRNA sequence NA coding protein psRNATarget
EZ068389.1
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  *||||||*|||||||||||*|||
targets:158   UACUAAAAAUUAGUCCCUAAAAA   180

2.5 TSA: Zea mays contig04024, mRNA sequence NA coding protein psRNATarget
XM_008666709.2
ncRNA:23   UUGAUUUGUAAUCAGGGAUCUUU   1
  ||-||||*||||*||||||||||
targets:437   AA-UAAAGAUUAUUCCCUAGAAA   458

2.5 PREDICTED: Zea mays uncharacterized LOC103643535 (LOC103643535), mRNA NA coding protein psRNATarget
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