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BaseInfo

ncRNA ID	novel_zma_miR3349
Species	Zea mays
Class	miRNA
Genome position	Chr8:34817932-34818044 [+]
Reference genome	RefGen_v4
Source	SRR2089715;SRR2089704;SRR2089705
Length	24
Mature sequence(if miRNA)	1 - UGGUAUGCGAGUGGAGGUGGGGUU - 24
Stem-loop(if miRNA)	--UGGUAU     U     U           G    AA    AA   --  UG    A         GCGAG GGAGG GGGGUUUUGCU CAUG  GUCG  GCU  GC  CGUU G         ||||| ||||| ||||||||||| ||||  ||||  |||  ||  ||||         UGCUU CUUCC CUCCAAAGCGG GUAC  UAGC  CGG  CG  GUAG G AGGUUAGG     -     C           A    AG    AA   CU  GU    G
Stem-loop sequence	UGGUAUGCGAGUGGAGGUGGGGUUUUGCUGCAUGAAGUCGAAGCUGCUGCGUUAGGGGAUGUGGCUCGGCAACGAUGACAUGAGGCGAAACCUCCCCUUCUUCGUGGAUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT070173.2	ncRNA:24   UUGGGG-UGGAGGUGAGCGUAUGGU   1   ||||||-|||||||||||||||||| targets:515   AACCCCCACCUCCACUCGCAUACCA   539 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0151L06 mRNA, complete cds	NA	coding protein	psRNATarget
BT055256.2	ncRNA:24   UUGGGG-UGGAGGUGAGCGUAUGGU   1   ||||||-|||||||||||||||||| targets:303   AACCCCCACCUCCACUCGCAUACCA   327 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0058D06 mRNA, complete cds	NA	coding protein	psRNATarget
BT066883.2	ncRNA:24   UUGGGG-UGGAGGUGAGCGUAUGGU   1   ||||||-|||||||||||||||||| targets:515   AACCCCCACCUCCACUCGCAUACCA   539 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0090O12 mRNA, complete cds	NA	coding protein	psRNATarget
BT088130.2	ncRNA:24   UUGGGGUGGAGGUGAGCGUAUGGU   1   |=||||||||=|||*||||||||| targets:431   AGCCCCACCUUCACACGCAUACCA   454 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0029O11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546594.1	ncRNA:24   UUGGGGUGGAGGUGAGCGUAUGGU   1   |=||||||||=|||*||||||||| targets:499   AGCCCCACCUUCACACGCAUACCA   522 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100502429 (LOC100502429), mRNA	NA	coding protein	psRNATarget