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BaseInfo

ncRNA ID	novel_zma_miR3337
Species	Zea mays
Class	miRNA
Genome position	Chr8:153561780-153561839 [-]
Reference genome	RefGen_v4
Source	SRR2089715
Length	24
Mature sequence(if miRNA)	37 - UCCGUUUUUUUAGUUAUCGUUGGA - 60
Stem-loop(if miRNA)	--               A     G  UAGU   UCCGUUUUUUUAGUU UCGUU GA    U   ||||||||||||||| ||||| ||   AGGCAAAAAAAUCAA AGCGA UU    C GG               C     G  UUAA
Stem-loop sequence	UCCGUUUUUUUAGUUAUCGUUGGAUAGUUCAAUUUUGAGCGACAACUAAAAAAACGGAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ239399.1	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=|||*||||||||||||||| targets:57   UCCAGCGACAACUAAAAAAACGGA   80 Target Full Sequence	1.0	Sequence 5394 from Patent EP2985353	NA	coding protein	psRNATarget
HI407269.1	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=|||*||||||||||||||| targets:57   UCCAGCGACAACUAAAAAAACGGA   80 Target Full Sequence	1.0	Sequence 5394 from Patent EP2074227	NA	coding protein	psRNATarget
JB167730.1	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=|||*||||||||||||||| targets:57   UCCAGCGACAACUAAAAAAACGGA   80 Target Full Sequence	1.0	Sequence 5394 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008669416.2	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=||||||*|||||||||||| targets:540   UCCAGCGAUAAAUAAAAAAACGGA   563 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100275307), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549872.1	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=|||*||||||||||||||| targets:1316   UCCAGCGACAACUAAAAAAACGGA   1339 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001175582.1	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=|||*||||||||||||||| targets:1483   UCCAGCGACAACUAAAAAAACGGA   1506 Target Full Sequence	1.0	Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA	NA	coding protein	psRNATarget
BT065656.1	ncRNA:24   AGGUUGCUAUUGAUUUUUUUGCCU   1   ||||=|||*||||||||||||||| targets:1483   UCCAGCGACAACUAAAAAAACGGA   1506 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds	NA	coding protein	psRNATarget