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BaseInfo

ncRNA ID	novel_zma_miR3328
Species	Zea mays
Class	miRNA
Genome position	Chr8:124853919-124853987 [+]
Reference genome	RefGen_v4
Source	SRR2089715;SRR2089701
Length	24
Mature sequence(if miRNA)	1 - AAAAGUACUCGGCAAAGAAGAUGU - 24
Stem-loop(if miRNA)	--                  A   G   - C       AAAAGUACUCGGCAAAGA GAU UUG C AAUGU   |||||||||||||||||| ||| ||| | ||||A   UUUUUGUGAGCCGUUUCU CUA AGC G UUAUC AC                  -   G   U C
Stem-loop sequence	AAAAGUACUCGGCAAAGAAGAUGUUGCCAAUGUACUAUUCGUCGAGAUCUCUUUGCCGAGUGUUUUUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU974507.1	ncRNA:24   UGUAGAAGAAACGGCUCAUGAAAA   1   |||*|||||||||||||||||||| targets:442   ACAGCUUCUUUGCCGAGUACUUUU   465 Target Full Sequence	0.0	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU957858.1	ncRNA:24   UGUAGAAGAAACGGCUCAUGAAAA   1   ||=*|||*|||*|||||||||||| targets:1236   ACGGCUUAUUUACCGAGUACUUUU   1259 Target Full Sequence	2.5	Zea mays clone 1627310 mRNA sequence	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   UGUAGAAGAAACGGCUCAUGAAAA   1   *==*|||||||||||||||||*|* targets:95   CUGCCUUCUUUGCCGAGUACUAUG   118 Target Full Sequence	2.5	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   UGUAGAAGAAACGGCUCAUGAAAA   1   *==*|||||||||||||||||*|* targets:95   CUGCCUUCUUUGCCGAGUACUAUG   118 Target Full Sequence	2.5	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   UGUAGAAGAAACGGCUCAUGAAAA   1   *==*|||||||||||||||||*|* targets:95   CUGCCUUCUUUGCCGAGUACUAUG   118 Target Full Sequence	2.5	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget