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BaseInfo

ncRNA ID novel_zma_miR3327
Species Zea mays
Class miRNA
Genome position Chr7:95338626-95338701 [+]
Reference genome RefGen_v4
Source SRR2089715;SRR5451006
Length 24
Mature sequence(if miRNA) 1 - AGUUGGCUCUCGGCAAAGACUGAC - 24
Stem-loop(if miRNA) --  U               -    ---A        AGC
  AG UGGCUCUCGGCAAAG ACUG    CGGCCGUC   U
  || ||||||||||||||| ||||    ||||||||
  UC ACCGAGAGCCGUUUC UGGC    GCCGGCAG   G
UU  C               G    AGUC        GGU
Stem-loop sequence AGUUGGCUCUCGGCAAAGACUGACGGCCGUCAGCUGUGGGACGGCCGCUGACGGUGCUUUGCCGAGAGCCACCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175015.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA NA coding protein psRNATarget
BT063684.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds NA coding protein psRNATarget