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BaseInfo

ncRNA ID	novel_zma_miR3318
Species	Zea mays
Class	miRNA
Genome position	Chr7:104007853-104007900 [-]
Reference genome	RefGen_v4
Source	SRR2089715;SRR2089702
Length	22
Mature sequence(if miRNA)	1 - UAAUCCAGCAGGGCGGUUGAGG - 22
Stem-loop(if miRNA)	--UAU   -    U        AC      ACC CCUU CUGGAUUG  C      ||| |||| ||||||||  C      UGG GGGA GACCUAAU  U GGAGU   C    C        AA
Stem-loop sequence	UAUACCCCUUUCUGGAUUGACCCUAAUAAUCCAGCAGGGCGGUUGAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU964611.1	ncRNA:22   GGAGUUGGCGGGACGACCUAAU   1   *||||=||*||||||||||||* targets:178   ACUCAGCCCCCCUGCUGGAUUC   199 Target Full Sequence	3.0	Zea mays clone 280334 ubiquitin-conjugating enzyme E2 W mRNA, complete cds	NA	coding protein	psRNATarget
EU961110.1	ncRNA:22   GGAGUUGGCGGGACGACCUAAU   1   *||||=||*||||||||||||* targets:124   ACUCAGCCCCCCUGCUGGAUUC   145 Target Full Sequence	3.0	Zea mays clone 232776 ubiquitin-conjugating enzyme E2 W mRNA, complete cds	NA	coding protein	psRNATarget
BT038458.1	ncRNA:22   GGAGUUGGCGGGACGACCUAAU   1   *||||=||*||||||||||||* targets:198   ACUCAGCCCCCCUGCUGGAUUC   219 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0274F06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001146794.1	ncRNA:22   GGAGUUGGCGGGACGACCUAAU   1   *||||=||*||||||||||||* targets:198   ACUCAGCCCCCCUGCUGGAUUC   219 Target Full Sequence	3.0	Zea mays ubiquitin conjugating enzyme 1 (LOC100272309), mRNA	NA	coding protein	psRNATarget
AY106904.1	ncRNA:22   GGAGUUGGCGGGACGACCUAAU   1   *||||=||*||||||||||||* targets:219   ACUCAGCCCCCCUGCUGGAUUC   240 Target Full Sequence	3.0	Zea mays PCO132238 mRNA sequence	NA	coding protein	psRNATarget