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BaseInfo

ncRNA ID novel_zma_miR3313
Species Zea mays
Class miRNA
Genome position Chr7:148700021-148700077 [-]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 34 - CGAUGGGUAAACGGGGAUGGGGAC - 57
Stem-loop(if miRNA) --  AUG  UA              CGG G
  CG   GG  AACGGGGAUGGGGA   G A
  ||   ||  ||||||||||||||   |
  GC   CC  UUGCCCCUACCCCU   C A
GG  --G  UC              -UA G
Stem-loop sequence CGAUGGGUAAACGGGGAUGGGGACGGGGAAGCAUUCCCCAUCCCCGUUCUCCGCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542351.1
ncRNA:24   CAGGGGUAGGGGCAAAUGGGUAGC   1
  *|||||||||||||||||||=|||
targets:311   AUCCCCAUCCCCGUUUACCCGUCG   334

1.5 PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA NA coding protein psRNATarget