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BaseInfo

ncRNA ID osa-miR160f-3p
Species Oryza sativa
Class miRNA
Genome position Chr8:24396882-24396981 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 72 - GCAUUGAGGGAGUCAUGCAGG - 92
Stem-loop(if miRNA) -  AUU   G    C         G       U   A      U    - U
 GG   AAC CUGC UGGCUCCCU AAUGCCA CCG GAAGCG GCCG C G
 ||   ||| |||| ||||||||| ||||||| ||| |||||| |||| |
 UC   UUG GACG ACUGAGGGA UUACGGU GGU CUUCGU CGGC G U
C  -GU   G    U         G       U   C      -    C G
Stem-loop sequence GGAUUAACGCUGCCUGGCUCCCUGAAUGCCAUCCGAGAAGCGUGCCGCUGUGGCCGGCUGCUUCCUGGUUGGCAUUGAGGGAGUCAUGCAGGGUUUGCUC

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).
2 PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors";
Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y;
PLoS Pathog. 7:e1002176(2011).