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BaseInfo

ncRNA ID	novel_zma_miR3308
Species	Zea mays
Class	miRNA
Genome position	Chr7:177206925-177206992 [-]
Reference genome	RefGen_v4
Source	SRR2089715
Length	24
Mature sequence(if miRNA)	1 - ACUCGUGUUGGCCUGUGGGGAUGG - 24
Stem-loop(if miRNA)	--            GCG       GAGGACAAGG   GUCUUCACAGGU   UAUGAGU          U   ||||||||||||   |||||||   UAGGGGUGUCCG   GUGCUCA          G GG            GUU       GAAAAUACAC
Stem-loop sequence	GUCUUCACAGGUGCGUAUGAGUGAGGACAAGGUGCACAUAAAAGACUCGUGUUGGCCUGUGGGGAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT069211.2	ncRNA:24   GGUAGGGGUGUCCGGUUGUGCUCA   1   =|||||||||||*||||||||||| targets:687   UCAUCCCCACAGACCAACACGAGU   710 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0334L03 mRNA, complete cds	NA	coding protein	psRNATarget
BT041365.1	ncRNA:24   GGUAGGGGUGUCCGGUUGUGCUCA   1   =|=||||=||||*||||||||||| targets:2327   UCGUCCCUACAGACCAACACGAGU   2350 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0056K22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147964.1	ncRNA:24   GGUAGGGGUGUCCGGUUGUGCUCA   1   =|=||||=||||*||||||||||| targets:2327   UCGUCCCUACAGACCAACACGAGU   2350 Target Full Sequence	2.5	Zea mays Pentatricopeptide repeat-containing protein mitochondrial (LOC100273546), mRNA	NA	coding protein	psRNATarget
EU940966.1	ncRNA:24   GGUA-------GGGGUGUCCGGUUGUGCUCA   1   =|||-------||||||||*||||||||||| targets:443   UCAUAUAUUGGCCCCACAGACCAACACGAGU   473 Target Full Sequence	1.5	Zea mays clone 1223688 mRNA sequence	NA	coding protein	psRNATarget