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BaseInfo

ncRNA ID	novel_zma_miR3303
Species	Zea mays
Class	miRNA
Genome position	Chr1:11149458-11149532 [+]
Reference genome	RefGen_v4
Source	SRR2089715;SRR2287031;SRR2287162;SRR2287163;SRR1997865;SRR5451004
Length	24
Mature sequence(if miRNA)	1 - AAUUCGGUUCGGUCUAUUCGGUUU - 24
Stem-loop(if miRNA)	--A    -        CUA          UGAAAUUUCG    AUUC GGUUCGGU   UUCGGUUUUU          G    |||| ||||||||   ||||||||||          G    UAAG CCAAGCCA   AAGCCAAGAG          U AGA    U        ---          UAAAAAUUAU
Stem-loop sequence	AAUUCGGUUCGGUCUAUUCGGUUUUUUGAAAUUUCGGGUUAUUAAAAAUGAGAACCGAAACCGAACCUGAAUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008650156.2	ncRNA:24   UUUGGCUUAUCUGGCUUGGCUUAA   1   |||||||||||||||||||||||* targets:668   AAACCGAAUAGACCGAACCGAAUA   691 Target Full Sequence	1.0	PREDICTED: Zea mays GDSL esterase/lipase At1g71691-like (LOC103628962), mRNA	NA	coding protein	psRNATarget
XM_008650156.2	ncRNA:24   UUUGGCUUAUCUGGCUUGGCUUAA   1   =||||||||||||||||||||*|| targets:566   GAACCGAAUAGACCGAACCGAUUU   589 Target Full Sequence	1.5	PREDICTED: Zea mays GDSL esterase/lipase At1g71691-like (LOC103628962), mRNA	NA	coding protein	psRNATarget
XM_020541164.1	ncRNA:24   UUUG-GCUUAUCUGGCUUGGCUUAA   1   ||||-|||||||||||||||||||| targets:168   AAACUCGAAUAGACCGAACCGAAUU   192 Target Full Sequence	0.0	PREDICTED: Zea mays UDP-glycosyltransferase 91A1-like (LOC109940837), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541164.1	ncRNA:24   UUUGGCUUAUCUGGCUUGGCUU-AA   1   ==||||||||||||||||||||-|| targets:68   GGACCGAAUAGACCGAACCGAAAUU   92 Target Full Sequence	3.0	PREDICTED: Zea mays UDP-glycosyltransferase 91A1-like (LOC109940837), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541163.1	ncRNA:24   UUUG-GCUUAUCUGGCUUGGCUUAA   1   ||||-|||||||||||||||||||| targets:37   AAACUCGAAUAGACCGAACCGAAUU   61 Target Full Sequence	0.0	PREDICTED: Zea mays UDP-glycosyltransferase 91A1-like (LOC109940837), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020545035.1	ncRNA:24   UUUGGCUUAUCUGGCUUGGCUUAA   1   ||=|||||||*|=||||||||||| targets:174   AAGCCGAAUAAAUCGAACCGAAUU   197 Target Full Sequence	2.5	PREDICTED: Zea mays aconitase 2 (aco2), transcript variant X3, mRNA	NA	coding protein	psRNATarget