ncRNA ID | novel_zma_miR3302 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:171605730-171605856 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACUAGUAACCGAACAUGGCCU - 21 |
Stem-loop(if miRNA) |
--   -              G  A   GA           A            C         A   GCU UGUUCGGUUGCUAG GG UUG  GGGGAUUGAAG GGAUUAAAUCCC UCCUAUUCA U   ||| |||||||||||||| || |||  ||||||||||| |||||||||||| |||||||||   CGG ACAAGCCAAUGAUC CU AAC  CCCCUAACUUC CCUAAUUUAGGG AGGAUAAGU U UC   U              A  A   UC           C            A         U |
Stem-loop sequence | GCUUGUUCGGUUGCUAGGGGAUUGGAGGGGAUUGAAGAGGAUUAAAUCCCCUCCUAUUCAAUUUUGAAUAGGAAGGGAUUUAAUCCCCUUCAAUCCCCCUCAAAUCACUAGUAACCGAACAUGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ059519.1 |
|
1.0 | TSA: Zea mays contig60641, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008654455.2 |
|
2.5 | PREDICTED: Zea mays type IV inositol polyphosphate 5-phosphatase 9 (LOC103632710), mRNA | NA | coding protein | psRNATarget |