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BaseInfo

ncRNA ID	novel_zma_miR3287
Species	Zea mays
Class	miRNA
Genome position	Chr6:111709565-111709729 [-]
Reference genome	RefGen_v4
Source	SRR2089715
Length	24
Mature sequence(if miRNA)	1 - AUAAAUUAGAGAAGUAAUCUGGCU - 24
Stem-loop(if miRNA)	--  UU      G          CG           CAACGU   A  U   A  GC      GA     A        G     CC  AUUAUU UUCUAAUUUA  UAAGUUUUGAU      GAA AA UCC GG  CAUUCC  GAGAA CGAACGGG CCU   ||  |||||| ||||||||||  |||||||||||      ||| || ||| ||  ||||||  ||||| |||||||| ||A   GG  UAAUGA GAGAUUAAAU  AUUUAAAAUUA      CUU UU AGG CC  GUAAGG  CUCUU GCUUGUCU GGA UC  UC      A          AU           CUCAAC   A  U   C  AA      GC     C        G
Stem-loop sequence	CCUUAUUAUUGUUCUAAUUUACGUAAGUUUUGAUCAACGUGAAAAAUUCCAGGGCCAUUCCGAGAGAAACGAACGGGGCCUAAGGGUCUGUUCGCUUCUCCGGGAAUGAACCCGGAUUUAUUCCAACUCAUUAAAAUUUAUAUAAAUUAGAGAAGUAAUCUGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547002.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020547001.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020547003.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020547005.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_020547012.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X15, mRNA	NA	coding protein	psRNATarget
XM_020547004.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020547006.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020547015.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:424   AGCCGGAUUACUUCUCUAAUUUAU   447 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X18, mRNA	NA	coding protein	psRNATarget
XM_020546998.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:425   AGCCGGAUUACUUCUCUAAUUUAU   448 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547000.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:425   AGCCGGAUUACUUCUCUAAUUUAU   448 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546999.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:425   AGCCGGAUUACUUCUCUAAUUUAU   448 Target Full Sequence	0.0	PREDICTED: Zea mays disease resistance protein RPP13-like (LOC103645703), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008659233.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:4756   AGCCGGAUUACUUCUCUAAUUUAU   4779 Target Full Sequence	0.0	PREDICTED: Zea mays xanthine dehydrogenase (LOC100384368), mRNA	NA	coding protein	psRNATarget
XM_008658795.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:2254   AGCCGGAUUACUUCUCUAAUUUAU   2277 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC103636441), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008658796.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:2237   AGCCGGAUUACUUCUCUAAUUUAU   2260 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC103636441), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542681.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:936   AGCCGGAUUACUUCUCUAAUUUAU   959 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC109939377 (LOC109939377), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542681.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |||==||||=|||||||||||||| targets:854   AGCUGGAUUGCUUCUCUAAUUUAU   877 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109939377 (LOC109939377), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542682.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:841   AGCCGGAUUACUUCUCUAAUUUAU   864 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC109939377 (LOC109939377), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542682.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |||==||||=|||||||||||||| targets:759   AGCUGGAUUGCUUCUCUAAUUUAU   782 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109939377 (LOC109939377), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU965019.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:1379   AGCCGGAUUACUUCUCUAAUUUAU   1402 Target Full Sequence	0.0	Zea mays clone 283239 DNA repair protein XRCC1 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156427.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:1379   AGCCGGAUUACUUCUCUAAUUUAU   1402 Target Full Sequence	0.0	Zea mays DNA-repair protein XRCC1 (si687009g07(336)), mRNA	NA	coding protein	psRNATarget
BT043254.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:1307   AGCCGGAUUACUUCUCUAAUUUAU   1330 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0133D22 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549609.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:1303   AGCCGGAUUACUUCUCUAAUUUAU   1326 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC100275396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ058087.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:1241   AGCCGGAUUACUUCUCUAAUUUAU   1264 Target Full Sequence	0.0	TSA: Zea mays contig59209, mRNA sequence	NA	coding protein	psRNATarget
BT041278.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:433   AGCCGGAUUACUUCUCUAAUUUAU   456 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0135F17 mRNA, complete cds	NA	coding protein	psRNATarget
LQ238027.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:57   AGCCGGAUUACUUCUCUAAUUUAU   80 Target Full Sequence	0.0	Sequence 4022 from Patent EP2985353	NA	coding protein	psRNATarget
HI405897.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:57   AGCCGGAUUACUUCUCUAAUUUAU   80 Target Full Sequence	0.0	Sequence 4022 from Patent EP2074227	NA	coding protein	psRNATarget
JB166358.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:57   AGCCGGAUUACUUCUCUAAUUUAU   80 Target Full Sequence	0.0	Sequence 4022 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235195.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1190 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235138.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1133 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235165.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1160 from Patent EP2985353	NA	coding protein	psRNATarget
JB163542.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1206 from Patent EP2559767	NA	coding protein	psRNATarget
JB163589.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1253 from Patent EP2559767	NA	coding protein	psRNATarget
HI403119.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1244 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235190.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1185 from Patent EP2985353	NA	coding protein	psRNATarget
JB163581.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1245 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235176.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1171 from Patent EP2985353	NA	coding protein	psRNATarget
HI403081.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1206 from Patent EP2074227	NA	coding protein	psRNATarget
JB163507.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1171 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235198.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1193 from Patent EP2985353	NA	coding protein	psRNATarget
JB163521.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1185 from Patent EP2559767	NA	coding protein	psRNATarget
JB163529.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1193 from Patent EP2559767	NA	coding protein	psRNATarget
HI403065.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1190 from Patent EP2074227	NA	coding protein	psRNATarget
JB163526.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1190 from Patent EP2559767	NA	coding protein	psRNATarget
JB163463.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1127 from Patent EP2559767	NA	coding protein	psRNATarget
HI403035.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1160 from Patent EP2074227	NA	coding protein	psRNATarget
JB163580.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1244 from Patent EP2559767	NA	coding protein	psRNATarget
HI403120.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1245 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235250.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1245 from Patent EP2985353	NA	coding protein	psRNATarget
HI403008.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1133 from Patent EP2074227	NA	coding protein	psRNATarget
JB163469.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1133 from Patent EP2559767	NA	coding protein	psRNATarget
HI403002.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1127 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235249.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1244 from Patent EP2985353	NA	coding protein	psRNATarget
HI403060.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1185 from Patent EP2074227	NA	coding protein	psRNATarget
HI403068.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1193 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235258.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1253 from Patent EP2985353	NA	coding protein	psRNATarget
HI403128.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1253 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235211.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1206 from Patent EP2985353	NA	coding protein	psRNATarget
HI403046.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1171 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235132.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1127 from Patent EP2985353	NA	coding protein	psRNATarget
JB163496.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||| targets:47   AGCCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1160 from Patent EP2559767	NA	coding protein	psRNATarget
EZ082256.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =||||||||||||||||||||||| targets:2   GGCCAGAUUACUUCUCUAAUUUAU   25 Target Full Sequence	0.0	TSA: Zea mays contig17898, mRNA sequence	NA	coding protein	psRNATarget
NM_001174421.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|||||=||||||||||||| targets:1577   AGCCGGAUUAUUUCUCUAAUUUAU   1600 Target Full Sequence	1.0	Zea mays uncharacterized LOC100381603 (cl28132_1), mRNA	NA	coding protein	psRNATarget
BT061734.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|||||=||||||||||||| targets:1577   AGCCGGAUUAUUUCUCUAAUUUAU   1600 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0178M21 mRNA, complete cds	NA	coding protein	psRNATarget
EU958313.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|||||=||||||||||||| targets:617   AGCCGGAUUAUUUCUCUAAUUUAU   640 Target Full Sequence	1.0	Zea mays clone 1684888 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549360.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:1102   AGCCGGAUUGCUUCUCUAAUUUAU   1125 Target Full Sequence	1.0	PREDICTED: Zea mays WRKY transcription factor WRKY76 (LOC103647425), mRNA	NA	coding protein	psRNATarget
BT017671.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:914   AGCCGGAUUGCUUCUCUAAUUUAU   937 Target Full Sequence	1.0	Zea mays clone EL01N0442B02.c mRNA sequence	NA	coding protein	psRNATarget
EU942882.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:116   AGCCGGAUUGCUUCUCUAAUUUAU   139 Target Full Sequence	1.0	Zea mays clone 1543225 mRNA sequence	NA	coding protein	psRNATarget
JB166367.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:56   AGCCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4031 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238036.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:56   AGCCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4031 from Patent EP2985353	NA	coding protein	psRNATarget
HI405906.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:56   AGCCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4031 from Patent EP2074227	NA	coding protein	psRNATarget
HI405931.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:55   AGCCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 4056 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238061.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:55   AGCCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 4056 from Patent EP2985353	NA	coding protein	psRNATarget
JB166392.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:55   AGCCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 4056 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238081.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:52   AGCCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4076 from Patent EP2985353	NA	coding protein	psRNATarget
JB166406.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:52   AGCCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4070 from Patent EP2559767	NA	coding protein	psRNATarget
JB166412.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:52   AGCCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4076 from Patent EP2559767	NA	coding protein	psRNATarget
HI405945.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:52   AGCCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4070 from Patent EP2074227	NA	coding protein	psRNATarget
HI405951.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:52   AGCCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4076 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238075.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||||||||||| targets:52   AGCCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4070 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235089.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=||||||||||||||||||| targets:47   AGUCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1084 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235213.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|||||=||||||||||||| targets:47   AGCCGGAUUAUUUCUCUAAUUUAU   70 Target Full Sequence	1.0	Sequence 1208 from Patent EP2985353	NA	coding protein	psRNATarget
HI403134.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=||||||||||||||||||| targets:47   AGUCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1259 from Patent EP2074227	NA	coding protein	psRNATarget
JB163595.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=||||||||||||||||||| targets:47   AGUCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1259 from Patent EP2559767	NA	coding protein	psRNATarget
JB163544.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|||||=||||||||||||| targets:47   AGCCGGAUUAUUUCUCUAAUUUAU   70 Target Full Sequence	1.0	Sequence 1208 from Patent EP2559767	NA	coding protein	psRNATarget
HI402959.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=||||||||||||||||||| targets:47   AGUCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1084 from Patent EP2074227	NA	coding protein	psRNATarget
JB163420.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=||||||||||||||||||| targets:47   AGUCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1084 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235264.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=||||||||||||||||||| targets:47   AGUCGGAUUACUUCUCUAAUUUAU   70 Target Full Sequence	0.0	Sequence 1259 from Patent EP2985353	NA	coding protein	psRNATarget
HI403083.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|||||=||||||||||||| targets:47   AGCCGGAUUAUUUCUCUAAUUUAU   70 Target Full Sequence	1.0	Sequence 1208 from Patent EP2074227	NA	coding protein	psRNATarget
BT062764.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||* targets:826   AGCCGGAUUACUUCUCUAAUUUAC   849 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0343N04 mRNA, complete cds	NA	coding protein	psRNATarget
BT062764.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=*|||||||=|||||||||| targets:955   AACCGUAUUACUUUUCUAAUUUAU   978 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0343N04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174739.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||||||||||||||||* targets:826   AGCCGGAUUACUUCUCUAAUUUAC   849 Target Full Sequence	1.0	Zea mays uncharacterized LOC100381966 (LOC100381966), mRNA	NA	coding protein	psRNATarget
NM_001174739.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=*|||||||=|||||||||| targets:955   AACCGUAUUACUUUUCUAAUUUAU   978 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381966 (LOC100381966), mRNA	NA	coding protein	psRNATarget
XM_020539417.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:3773   AGCCGGAUUGCUUCUUUAAUUUAU   3796 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020539392.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:3523   AGCCGGAUUGCUUCUUUAAUUUAU   3546 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539386.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:3505   AGCCGGAUUGCUUCUUUAAUUUAU   3528 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539406.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:3488   AGCCGGAUUGCUUCUUUAAUUUAU   3511 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020539404.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:3470   AGCCGGAUUGCUUCUUUAAUUUAU   3493 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008647452.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:3303   GGCCGGAUUGCUUCUCUAAUUUAU   3326 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008647453.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:3315   GGCCGGAUUGCUUCUCUAAUUUAU   3338 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103627145 (LOC103627145), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676981.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:34   GGCCGGAUUGCUUCUCUAAUUUAU   57 Target Full Sequence	1.0	PREDICTED: Zea mays protein MALE DISCOVERER 1 (LOC103651364), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001196885.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:1232   AGCCGGAUUGCUUCUUUAAUUUAU   1255 Target Full Sequence	2.5	Zea mays Protein kinase superfamily protein (LOC100502407), mRNA	NA	coding protein	psRNATarget
BT088026.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:1232   AGCCGGAUUGCUUCUUUAAUUUAU   1255 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0366I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT019200.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:986   GGCCGGAUUGCUUCUCUAAUUUAU   1009 Target Full Sequence	1.0	Zea mays clone Contig873.F mRNA sequence	NA	coding protein	psRNATarget
EU973085.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||==||||||||||||| targets:974   AGCCGGAUUGUUUCUCUAAUUUAU   997 Target Full Sequence	2.0	Zea mays clone 393049 DAG protein mRNA, complete cds	NA	coding protein	psRNATarget
EU977040.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||==||||||||||||| targets:638   AGCCGGAUUGUUUCUCUAAUUUAU   661 Target Full Sequence	2.0	Zea mays clone 997067 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EZ056395.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||==||||||||||||| targets:79   AGCCGGAUUGUUUCUCUAAUUUAU   102 Target Full Sequence	2.0	TSA: Zea mays contig57517, mRNA sequence	NA	coding protein	psRNATarget
HI405910.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:56   AGCCGGAUUGCUUCUUUAAUUUAU   79 Target Full Sequence	2.5	Sequence 4035 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238035.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:56   AGCCGGAUUGCUUCUUUAAUUUAU   79 Target Full Sequence	2.5	Sequence 4030 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238040.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:56   AGCCGGAUUGCUUCUUUAAUUUAU   79 Target Full Sequence	2.5	Sequence 4035 from Patent EP2985353	NA	coding protein	psRNATarget
HI405905.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:56   AGCCGGAUUGCUUCUUUAAUUUAU   79 Target Full Sequence	2.5	Sequence 4030 from Patent EP2074227	NA	coding protein	psRNATarget
JB166371.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:56   AGCCGGAUUGCUUCUUUAAUUUAU   79 Target Full Sequence	2.5	Sequence 4035 from Patent EP2559767	NA	coding protein	psRNATarget
JB166368.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:56   GGCCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4032 from Patent EP2559767	NA	coding protein	psRNATarget
JB166366.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:56   AGCCGGAUUGCUUCUUUAAUUUAU   79 Target Full Sequence	2.5	Sequence 4030 from Patent EP2559767	NA	coding protein	psRNATarget
HI405907.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:56   GGCCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4032 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238037.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||=|||||||||||||| targets:56   GGCCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4032 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238064.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:55   AGCCGGAUUGCUUCUUUAAUUUAU   78 Target Full Sequence	2.5	Sequence 4059 from Patent EP2985353	NA	coding protein	psRNATarget
HI405928.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:55   AGCCGGAUUGCUUCUUUAAUUUAU   78 Target Full Sequence	2.5	Sequence 4053 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238058.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:55   AGCCGGAUUGCUUCUUUAAUUUAU   78 Target Full Sequence	2.5	Sequence 4053 from Patent EP2985353	NA	coding protein	psRNATarget
JB166389.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:55   AGCCGGAUUGCUUCUUUAAUUUAU   78 Target Full Sequence	2.5	Sequence 4053 from Patent EP2559767	NA	coding protein	psRNATarget
JB166395.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:55   AGCCGGAUUGCUUCUUUAAUUUAU   78 Target Full Sequence	2.5	Sequence 4059 from Patent EP2559767	NA	coding protein	psRNATarget
HI405934.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:55   AGCCGGAUUGCUUCUUUAAUUUAU   78 Target Full Sequence	2.5	Sequence 4059 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238091.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:54   AGCCGGAUUGCUUCUUUAAUUUAU   77 Target Full Sequence	2.5	Sequence 4086 from Patent EP2985353	NA	coding protein	psRNATarget
HI405961.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:54   AGCCGGAUUGCUUCUUUAAUUUAU   77 Target Full Sequence	2.5	Sequence 4086 from Patent EP2074227	NA	coding protein	psRNATarget
JB166422.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=||||=|||||=|||||||| targets:54   AGCCGGAUUGCUUCUUUAAUUUAU   77 Target Full Sequence	2.5	Sequence 4086 from Patent EP2559767	NA	coding protein	psRNATarget
EZ103292.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |||==||||||||||||||||||* targets:94   AGCUGGAUUACUUCUCUAAUUUAG   117 Target Full Sequence	1.0	TSA: Zea mays contig38949, mRNA sequence	NA	coding protein	psRNATarget
XM_020540976.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||==||||||||||||| targets:4579   GGCCGGAUUGUUUCUCUAAUUUAU   4602 Target Full Sequence	2.0	PREDICTED: Zea mays indole-3-acetaldehyde oxidase-like (LOC103631977), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654752.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*|||||||=|||||||||||||| targets:2458   AACCAGAUUGCUUCUCUAAUUUAU   2481 Target Full Sequence	1.0	PREDICTED: Zea mays putative cysteine-rich receptor-like protein kinase 35 (LOC103633070), mRNA	NA	coding protein	psRNATarget
FJ805752.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||||||||||||||||| targets:1130   AACCGGAUUACUUCUCUAAUUUAU   1153 Target Full Sequence	0.0	Zea mays DRE-binding protein 4 (DBP4) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177010.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||||||||||||||||| targets:1130   AACCGGAUUACUUCUCUAAUUUAU   1153 Target Full Sequence	0.0	Zea mays DRE-binding protein 4 (DBP4), mRNA	NA	coding protein	psRNATarget
EU941248.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|||=||||==||||||||||||| targets:281   GGCCGGAUUGUUUCUCUAAUUUAU   304 Target Full Sequence	2.0	Zea mays clone 1431203 mRNA sequence	NA	coding protein	psRNATarget
EZ050168.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =|=|=||||=|||||||||||||| targets:311   GGUCGGAUUGCUUCUCUAAUUUAU   334 Target Full Sequence	1.0	TSA: Zea mays contig51286, mRNA sequence	NA	coding protein	psRNATarget
HI406089.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*|||||||=|||||||||||||| targets:56   GACCAGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4214 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238219.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*|||||||=|||||||||||||| targets:56   GACCAGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4214 from Patent EP2985353	NA	coding protein	psRNATarget
JB166550.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*|||||||=|||||||||||||| targets:56   GACCAGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4214 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008675573.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:3474   AACCGGAUUGCUUCUCUAAUUUAU   3497 Target Full Sequence	1.0	PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020550140.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:3474   AACCGGAUUGCUUCUCUAAUUUAU   3497 Target Full Sequence	1.0	PREDICTED: Zea mays rust resistance kinase Lr10 (LOC103649884), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674095.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:2099   AACCGGAUUGCUUCUCUAAUUUAU   2122 Target Full Sequence	1.0	PREDICTED: Zea mays putative MADS-box transcription factor family protein (MADS69), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT066418.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:1638   AUCCGGAUUGCUUCUCUAAUUUAU   1661 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0124A04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175825.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:1638   AUCCGGAUUGCUUCUCUAAUUUAU   1661 Target Full Sequence	1.0	Zea mays putative DEAD-box ATP-dependent RNA helicase family protein (LOC100383160), mRNA	NA	coding protein	psRNATarget
NM_001165772.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*|||||||==||||||||||||| targets:2029   AACCAGAUUGUUUCUCUAAUUUAU   2052 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304333 (LOC100304333), mRNA	NA	coding protein	psRNATarget
BT060871.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*|||||||==||||||||||||| targets:2029   AACCAGAUUGUUUCUCUAAUUUAU   2052 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0063H21 mRNA, complete cds	NA	coding protein	psRNATarget
EU965080.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:1581   AACCGGAUUGCUUCUCUAAUUUAU   1604 Target Full Sequence	1.0	Zea mays clone 283644 mRNA sequence	NA	coding protein	psRNATarget
BT040019.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*|||||||==||||||||||||| targets:960   AACCAGAUUGUUUCUCUAAUUUAU   983 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0058P12 mRNA, complete cds	NA	coding protein	psRNATarget
EZ061700.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:133   AACCGGAUUGCUUCUCUAAUUUAU   156 Target Full Sequence	1.0	TSA: Zea mays contig62822, mRNA sequence	NA	coding protein	psRNATarget
JB166409.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4073 from Patent EP2559767	NA	coding protein	psRNATarget
HI405948.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4073 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238078.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4073 from Patent EP2985353	NA	coding protein	psRNATarget
HI407238.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:56   AACCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 5363 from Patent EP2074227	NA	coding protein	psRNATarget
HI405930.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=|||||=||||||||||||| targets:56   AACCGGAUUAUUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4055 from Patent EP2074227	NA	coding protein	psRNATarget
JB167699.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:56   AACCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 5363 from Patent EP2559767	NA	coding protein	psRNATarget
JB166391.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=|||||=||||||||||||| targets:56   AACCGGAUUAUUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4055 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238060.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=|||||=||||||||||||| targets:56   AACCGGAUUAUUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 4055 from Patent EP2985353	NA	coding protein	psRNATarget
LQ239368.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:56   AACCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 5363 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240874.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:55   AUCCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 6869 from Patent EP2985353	NA	coding protein	psRNATarget
JB166393.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:55   AACCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 4057 from Patent EP2559767	NA	coding protein	psRNATarget
HI408744.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:55   AUCCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 6869 from Patent EP2074227	NA	coding protein	psRNATarget
JB169205.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:55   AUCCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 6869 from Patent EP2559767	NA	coding protein	psRNATarget
HI405932.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:55   AACCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 4057 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238062.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:55   AACCGGAUUGCUUCUCUAAUUUAU   78 Target Full Sequence	1.0	Sequence 4057 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238070.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4065 from Patent EP2985353	NA	coding protein	psRNATarget
JB166400.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4064 from Patent EP2559767	NA	coding protein	psRNATarget
JB166401.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4065 from Patent EP2559767	NA	coding protein	psRNATarget
HI405939.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4064 from Patent EP2074227	NA	coding protein	psRNATarget
HI405940.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4065 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238069.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:52   AACCGGAUUGCUUCUCUAAUUUAU   75 Target Full Sequence	1.0	Sequence 4064 from Patent EP2985353	NA	coding protein	psRNATarget
HI406341.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:9   AACCGGAUUGCUUCUCUAAUUUAU   32 Target Full Sequence	1.0	Sequence 4466 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238471.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:9   AACCGGAUUGCUUCUCUAAUUUAU   32 Target Full Sequence	1.0	Sequence 4466 from Patent EP2985353	NA	coding protein	psRNATarget
JB166802.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||=|||||||||||||| targets:9   AACCGGAUUGCUUCUCUAAUUUAU   32 Target Full Sequence	1.0	Sequence 4466 from Patent EP2559767	NA	coding protein	psRNATarget
NM_001153653.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:2555   GACCGGAUUGCUUCUCUAAUUUAU   2578 Target Full Sequence	1.0	Zea mays ATP-binding cassette sub-family G member 2 (LOC100280733), mRNA	NA	coding protein	psRNATarget
EU953449.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:2555   GACCGGAUUGCUUCUCUAAUUUAU   2578 Target Full Sequence	1.0	Zea mays clone 1412735 ATP-binding cassette sub-family G member 2 mRNA, complete cds	NA	coding protein	psRNATarget
BT063859.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*|=||||||||||||||||||=| targets:178   GUCUAGAUUACUUCUCUAAUUUGU   201 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0113G11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175060.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*|=||||||||||||||||||=| targets:178   GUCUAGAUUACUUCUCUAAUUUGU   201 Target Full Sequence	1.5	Zea mays uncharacterized LOC100382311 (LOC100382311), mRNA	NA	coding protein	psRNATarget
EU953779.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:665   GACCGGAUUGCUUCUCUAAUUUAU   688 Target Full Sequence	1.0	Zea mays clone 1445891 mRNA sequence	NA	coding protein	psRNATarget
EU949492.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:290   GACCGGAUUGCUUCUCUAAUUUAU   313 Target Full Sequence	1.0	Zea mays clone 420421 mRNA sequence	NA	coding protein	psRNATarget
HI407339.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:54   GACCGGAUUGCUUCUCUAAUUUAU   77 Target Full Sequence	1.0	Sequence 5464 from Patent EP2074227	NA	coding protein	psRNATarget
JB167800.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:54   GACCGGAUUGCUUCUCUAAUUUAU   77 Target Full Sequence	1.0	Sequence 5464 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239469.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:54   GACCGGAUUGCUUCUCUAAUUUAU   77 Target Full Sequence	1.0	Sequence 5464 from Patent EP2985353	NA	coding protein	psRNATarget
HI405804.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:56   GACCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 3929 from Patent EP2074227	NA	coding protein	psRNATarget
JB166265.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:56   GACCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 3929 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237934.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   =*||=||||=|||||||||||||| targets:56   GACCGGAUUGCUUCUCUAAUUUAU   79 Target Full Sequence	1.0	Sequence 3929 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020547654.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||==||||||||||||| targets:4384   AACCGGAUUGUUUCUCUAAUUUAU   4407 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100279517 (LOC100279517), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020538690.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:4163   AAUCGGAUUGCUUCUCUAAUUUAU   4186 Target Full Sequence	1.0	PREDICTED: Zea mays kinesin-like protein KIN-4C (LOC103627710), mRNA	NA	coding protein	psRNATarget
XM_008651631.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=|||*||||||=|||||||| targets:3404   AGUCGGAUCACUUCUUUAAUUUAU   3427 Target Full Sequence	2.5	PREDICTED: Zea mays Topoisomerase II-associated protein PAT1 (LOC103630586), mRNA	NA	coding protein	psRNATarget
XM_008653753.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||==||||||||||||| targets:840   ACCCGGAUUGUUUCUCUAAUUUAU   863 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008653754.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||==||||||||||||| targets:638   ACCCGGAUUGUUUCUCUAAUUUAU   661 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541330.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||==||||||||||||| targets:456   ACCCGGAUUGUUUCUCUAAUUUAU   479 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020548714.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:2305   AAUCGGAUUGCUUCUCUAAUUUAU   2328 Target Full Sequence	1.0	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008672660.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:2256   AAUCGGAUUGCUUCUCUAAUUUAU   2279 Target Full Sequence	1.0	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008653755.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*||=||||==||||||||||||| targets:374   ACCCGGAUUGUUUCUCUAAUUUAU   397 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103631908 (LOC103631908), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008672662.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:2224   AAUCGGAUUGCUUCUCUAAUUUAU   2247 Target Full Sequence	1.0	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020548713.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:2195   AAUCGGAUUGCUUCUCUAAUUUAU   2218 Target Full Sequence	1.0	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008672661.2	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:2182   AAUCGGAUUGCUUCUCUAAUUUAU   2205 Target Full Sequence	1.0	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548712.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |*=|=||||=|||||||||||||| targets:2100   AAUCGGAUUGCUUCUCUAAUUUAU   2123 Target Full Sequence	1.0	PREDICTED: Zea mays laccase-15 (LOC103648173), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT041125.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   |||==||||=|||||||||*|||| targets:1313   AGCUGGAUUGCUUCUCUAACUUAU   1336 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0177J19 mRNA, complete cds	NA	coding protein	psRNATarget
EU961636.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||||=|*||==||||||||||||| targets:1140   AGCCGGUUUGUUUCUCUAAUUUAU   1163 Target Full Sequence	3.0	Zea mays clone 237217 mRNA sequence	NA	coding protein	psRNATarget
BT017823.1	ncRNA:24   UCGGUCUAAUGAAGAGAUUAAAUA   1   ||=|=|||*||||||=|||||||| targets:776   AGUCGGAUCACUUCUUUAAUUUAU   799 Target Full Sequence	2.5	Zea mays clone EL01N0508B10.c mRNA sequence	NA	coding protein	psRNATarget